RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 NIPSNAP1Q9BPW8 284 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 UCK2Q9BZX2 261 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 BCO1Q9HAY6 547 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 INIPQ9NRY2 104 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 COQ3Q9NZJ6 369 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 SIGLEC7Q9Y286 467 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 RRP15Q9Y3B9 282 aaKnown RBP12.13□□□□□ -0.47
VMP1-210ENST00000589823 MAGED1Q9Y5V3 778 aaPredicted RBP12.13□□□□□ -0.47
VMP1-210ENST00000589823 POLEQ07864 2286 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 NBASA2RRP1 2371 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 A0A0G2JNJ9 132 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 A0A1W2PRG6 482 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 AKAP8O43823 692 aaKnown RBP12.12□□□□□ -0.47
VMP1-210ENST00000589823 SERPINI2O75830 405 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 NDUFB2O95178 105 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 F13BP05160 661 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 TSPAN19P0C672 248 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 AGTR1P30556 359 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 UQCRC1P31930 480 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 RPL4P36578 427 aaKnown RBP12.12□□□□□ -0.47
VMP1-210ENST00000589823 SMSP52788 366 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 RPS4XP62701 263 aaKnown RBP12.12□□□□□ -0.47
VMP1-210ENST00000589823 POU3F1Q03052 451 aaPredicted RBP12.12□□□□□ -0.47
VMP1-210ENST00000589823 RPL13AP3Q6NVV1 102 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 SMARCD3Q6STE5 483 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 RASSF6Q6ZTQ3 369 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 CREB3L2Q70SY1 520 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 MOSPD2Q8NHP6 518 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 FANK1Q8TC84 345 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 ZNF775Q96BV0 537 aaPredicted RBP12.12□□□□□ -0.47
VMP1-210ENST00000589823 CCDC120Q96HB5 630 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 CIB1Q99828 191 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 C9orf16Q9BUW7 83 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 SFXN3Q9BWM7 321 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 GABARAPL1Q9H0R8 117 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 MCCC2Q9HCC0 563 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 FANCFQ9NPI8 374 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 B3GAT1Q9P2W7 334 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 STX18Q9P2W9 335 aaKnown RBP12.12□□□□□ -0.47
VMP1-210ENST00000589823 Q9UFV3 132 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 ING1Q9UK53 422 aaPredicted RBP12.12□□□□□ -0.47
VMP1-210ENST00000589823 NOSIPQ9Y314 301 aaKnown RBP12.12□□□□□ -0.47
VMP1-210ENST00000589823 FLVCR1Q9Y5Y0 555 aa12.12□□□□□ -0.47
VMP1-210ENST00000589823 ESPL1Q14674 2120 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 KIAA1549Q9HCM3 1950 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 MCIDASD6RGH6 385 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 PDLIM1O00151 329 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 PTP4A3O75365 173 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 HPRP00739 348 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 HLA-DOBP13765 273 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 OPRM1P35372 400 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 CTXN1P60606 82 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 FOXF2Q12947 444 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 GUSBP1Q15486 140 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 FAHD1Q6P587 224 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 CD300LDQ6UXZ3 194 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 ZNF620Q6ZNG0 422 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 GALNT5Q7Z7M9 940 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 EPHX4Q8IUS5 362 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 NAXEQ8NCW5 288 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 OR52L1Q8NGH7 329 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 OR6K3Q8NGY3 331 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 ASB5Q8WWX0 329 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 EME1Q96AY2 570 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 RBM4BQ9BQ04 359 aaKnown RBP12.11□□□□□ -0.47
VMP1-210ENST00000589823 RBM4Q9BWF3 364 aaKnown RBP12.11□□□□□ -0.47
VMP1-210ENST00000589823 OSBPL10Q9BXB5 764 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 OR52D1Q9H346 318 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 KRT84Q9NSB2 600 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 PARPBPQ9NWS1 579 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 ZNF629Q9UEG4 869 aaPredicted RBP12.11□□□□□ -0.47
VMP1-210ENST00000589823 ERRFI1Q9UJM3 462 aaPredicted RBP12.11□□□□□ -0.47
VMP1-210ENST00000589823 RNF6Q9Y252 685 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 POFUT2Q9Y2G5 429 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 CDH10Q9Y6N8 788 aa12.11□□□□□ -0.47
VMP1-210ENST00000589823 PHF3Q92576 2039 aaKnown RBP12.1□□□□□ -0.47
VMP1-210ENST00000589823 H3BN98 237 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 DVL2O14641 736 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 TRAF3IP2O43734 574 aaPredicted RBP12.1□□□□□ -0.47
VMP1-210ENST00000589823 MRPL33O75394 65 aaKnown RBP12.1□□□□□ -0.47
VMP1-210ENST00000589823 IL18BPO95998 194 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 BCL10O95999 233 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 CHRNB4P30926 498 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 SLC6A6P31641 620 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 KIR2DL2P43627 348 aaPredicted RBP12.1□□□□□ -0.47
VMP1-210ENST00000589823 DAPP51397 102 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 DAP3P51398 398 aaKnown RBP12.1□□□□□ -0.47
VMP1-210ENST00000589823 CLDN17P56750 224 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 ADORA2A-AS1P86434 159 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 FHL1Q13642 323 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 TRIP10Q15642 601 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 RFX4Q33E94 735 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 NIPAL3Q6P499 406 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 KLHL17Q6TDP4 642 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 CASP12Q6UXS9 341 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 SLC35D2Q76EJ3 337 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 AAED1Q7RTV5 226 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 NUFIP2Q7Z417 695 aaKnown RBP12.1□□□□□ -0.47
VMP1-210ENST00000589823 HDDC2Q7Z4H3 204 aa12.1□□□□□ -0.47
VMP1-210ENST00000589823 IGFN1Q86VF2 1251 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms