RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 B3GALT5Q9Y2C3 310 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 MED12Q93074 2177 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 NCOR2Q9Y618 2525 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 AQP7P3A6NL99 342 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 EIF4E1BA6NMX2 242 aaKnown RBP10.11□□□□□ -0.79
VMP1-207ENST00000588131 NPIPA5E9PKD4 350 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 IMPA2O14732 288 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 ARPC3O15145 178 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 SMAD9O15198 467 aaKnown RBP10.11□□□□□ -0.79
VMP1-207ENST00000588131 ZNHIT1O43257 154 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 TLX2O43763 284 aaPredicted RBP10.11□□□□□ -0.79
VMP1-207ENST00000588131 MPZL2O60487 215 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 IGHMP01871 453 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 APEHP13798 732 aaKnown RBP10.11□□□□□ -0.79
VMP1-207ENST00000588131 HIST1H1CP16403 213 aaKnown RBP10.11□□□□□ -0.79
VMP1-207ENST00000588131 ENPP1P22413 925 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 CSNK2A1P68400 391 aaPredicted RBP10.11□□□□□ -0.79
VMP1-207ENST00000588131 HSF1Q00613 529 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 SRYQ05066 204 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.11□□□□□ -0.79
VMP1-207ENST00000588131 CRMP1Q14194 572 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 INAQ16352 499 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 ACKR1Q16570 336 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 MESTQ5EB52 335 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 TMEM201Q5SNT2 666 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 VASNQ6EMK4 673 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 C19orf48Q6RUI8 117 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 PAQR6Q6TCH4 344 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 NHLRC1Q6VVB1 395 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 WDFY1Q8IWB7 410 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 FAM26EQ8N5C1 309 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 EXD3Q8N9H8 876 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 Q8NA96 180 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 SLC37A3Q8NCC5 494 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 SDR9C7Q8NEX9 313 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 OR52E2Q8NGJ4 325 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 OR8J1Q8NGP2 316 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 OR4K13Q8NH42 304 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 ZPLD1Q8TCW7 415 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 TRUB1Q8WWH5 349 aaKnown RBP10.11□□□□□ -0.79
VMP1-207ENST00000588131 HDAC2Q92769 488 aaKnown RBP10.11□□□□□ -0.79
VMP1-207ENST00000588131 PNPLA2Q96AD5 504 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 WDYHV1Q96HA8 205 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 PLEKHA8Q96JA3 519 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 TIMP4Q99727 224 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 TEX12Q9BXU0 123 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 NDEL1Q9GZM8 345 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 MED20Q9H944 212 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 FANCFQ9NPI8 374 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 HINT3Q9NQE9 182 aaKnown RBP10.11□□□□□ -0.79
VMP1-207ENST00000588131 DNAJC27Q9NZQ0 273 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 TUBD1Q9UJT1 453 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 ZMIZ1Q9ULJ6 1067 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 NPIPA1Q9UND3 350 aa10.11□□□□□ -0.79
VMP1-207ENST00000588131 IGF2RP11717 2491 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 PTPRQQ9UMZ3 2332 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 A0A1B0GVC2 190 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 FAM183AA6NL82 134 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 RIIAD1A6NNX1 92 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 KDM4EB2RXH2 506 aaPredicted RBP10.1□□□□□ -0.79
VMP1-207ENST00000588131 SLC1A7O00341 560 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 DNPH1O43598 174 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 XPNPEP2O43895 674 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 EIF1BO60739 113 aaKnown RBP10.1□□□□□ -0.79
VMP1-207ENST00000588131 ENTPD6O75354 484 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 TXNDC12O95881 172 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 LYNP07948 512 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 NOS3P29474 1203 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 SDHAP31040 664 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 AGFG1P52594 562 aaKnown RBP10.1□□□□□ -0.79
VMP1-207ENST00000588131 NUDT6P53370 316 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 CARD18P57730 90 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 RAC3P60763 192 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 TEKQ02763 1124 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 POU3F1Q03052 451 aaPredicted RBP10.1□□□□□ -0.79
VMP1-207ENST00000588131 ITGADQ13349 1161 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 KRR1Q13601 381 aaKnown RBP10.1□□□□□ -0.79
VMP1-207ENST00000588131 MELKQ14680 651 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 BCL2A1Q16548 175 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 OCLNQ16625 522 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 PLBD1Q6P4A8 553 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 PLXDC2Q6UX71 529 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 CXXC5Q7LFL8 322 aaKnown RBP10.1□□□□□ -0.79
VMP1-207ENST00000588131 CPOQ8IVL8 374 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 GHDCQ8N2G8 530 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 MEIOBQ8N635 442 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 CYB561A3Q8NBI2 242 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 ANKK1Q8NFD2 765 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 BBS1Q8NFJ9 593 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 BPIFB6Q8NFQ5 453 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 ZNF519Q8TB69 540 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 ROBO4Q8WZ75 1007 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 SGCDQ92629 289 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 LRR1Q96L50 414 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 ZNF582Q96NG8 517 aaPredicted RBP10.1□□□□□ -0.79
VMP1-207ENST00000588131 NMNAT3Q96T66 252 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 DDOQ99489 341 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 RHNO1Q9BSD3 238 aa10.1□□□□□ -0.79
VMP1-207ENST00000588131 NAA11Q9BSU3 229 aaPredicted RBP10.1□□□□□ -0.79
VMP1-207ENST00000588131 HCAR1Q9BXC0 346 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms