RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 OR4A8P0C604 315 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 HLA-DOBP13765 273 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 PPIBP23284 216 aaKnown RBP12.46□□□□□ -0.41
VMP1-206ENST00000587945 SLC6A2P23975 617 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 SH3BGRP55822 239 aaPredicted RBP12.46□□□□□ -0.41
VMP1-206ENST00000587945 RGS8P57771 180 aaPredicted RBP12.46□□□□□ -0.41
VMP1-206ENST00000587945 NCALDP61601 193 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 VLDLRP98155 873 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 OR1Q1Q15612 314 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 ADIPOQQ15848 244 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 CARTPTQ16568 116 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 CEACAM16Q2WEN9 425 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 ULK3Q6PHR2 472 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 DLEU7Q6UYE1 221 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 SLC46A3Q7Z3Q1 461 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 WDFY1Q8IWB7 410 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 GPR137CQ8N3F9 429 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 SMYD1Q8NB12 490 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 THOC1Q96FV9 657 aaKnown RBP12.46□□□□□ -0.41
VMP1-206ENST00000587945 ATP6V1G3Q96LB4 118 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 OR2M2Q96R28 347 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 VRK1Q99986 396 aaPredicted RBP12.46□□□□□ -0.41
VMP1-206ENST00000587945 CPPED1Q9BRF8 314 aaPredicted RBP12.46□□□□□ -0.41
VMP1-206ENST00000587945 EMC6Q9BV81 110 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 SPATA5L1Q9BVQ7 753 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 TMEM38AQ9H6F2 299 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 CRLF2Q9HC73 371 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 GMEB1Q9Y692 573 aa12.46□□□□□ -0.41
VMP1-206ENST00000587945 ATRQ13535 2644 aa12.46□□□□□ -0.42
VMP1-206ENST00000587945 A0A087WUJ7 227 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 EVPLLA8MZ36 301 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 MS4A18H0YCH9 400 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 M0R3G1 203 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 IGKV3-15P01624 115 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 IGHV4-31P0DP07 118 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 NQO1P15559 274 aaKnown RBP12.45□□□□□ -0.42
VMP1-206ENST00000587945 CBR1P16152 277 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 GPX2P18283 190 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 USF1P22415 310 aaPredicted RBP12.45□□□□□ -0.42
VMP1-206ENST00000587945 ATP4BP51164 291 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 IDH3GP51553 393 aaPredicted RBP12.45□□□□□ -0.42
VMP1-206ENST00000587945 SNRPD2P62316 118 aaKnown RBP12.45□□□□□ -0.42
VMP1-206ENST00000587945 HGFACQ04756 655 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 SQLEQ14534 574 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 MS4A18Q3C1V0 323 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 CHRFAM7AQ494W8 412 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 FAM91A1Q658Y4 838 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 C5orf46Q6UWT4 87 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 NET1Q7Z628 596 aaPredicted RBP12.45□□□□□ -0.42
VMP1-206ENST00000587945 MDP1Q86V88 176 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 ARMC8Q8IUR7 673 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 UEVLDQ8IX04 471 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 TMEM123Q8N131 208 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 DYDC1Q8WWB3 177 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 PROX1Q92786 737 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 SLC47A1Q96FL8 570 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 TXNDC15Q96J42 360 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 MOGAT1Q96PD6 335 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 ZNF317Q96PQ6 595 aaPredicted RBP12.45□□□□□ -0.42
VMP1-206ENST00000587945 ZNF607Q96SK3 696 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 TMEM27Q9HBJ8 222 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 SELENONQ9NZV5 590 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 TESQ9UGI8 421 aaKnown RBP12.45□□□□□ -0.42
VMP1-206ENST00000587945 SLC13A4Q9UKG4 626 aa12.45□□□□□ -0.42
VMP1-206ENST00000587945 A0A0B4J2E0 115 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 LOC102725191A0A1B0GVB3 256 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 A0A1B0GX12 115 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 PRORSD1PA6NEY8 169 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 B9A039 149 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 M0R3H8 397 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 MFN2O95140 757 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 BGLAPP02818 100 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 CSF3P09919 207 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 HOXB1P14653 301 aaPredicted RBP12.44□□□□□ -0.42
VMP1-206ENST00000587945 ZNF16P17020 682 aaPredicted RBP12.44□□□□□ -0.42
VMP1-206ENST00000587945 THBS4P35443 961 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 CAPZA2P47755 286 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 PDLIM4P50479 330 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 CDH12P55289 794 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 NPRL3Q12980 569 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 SELPLGQ14242 412 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 GGTLC2Q14390 218 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 C3orf36Q3SXR2 165 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 RUNDC3AQ59EK9 446 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 CYB5R2Q6BCY4 276 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 PTOV1Q86YD1 416 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 C10orf53Q8N6V4 93 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 FAM169BQ8N8A8 192 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 HIPK4Q8NE63 616 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 PIK3C3Q8NEB9 887 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 ANKK1Q8NFD2 765 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 OR4F15Q8NGB8 312 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 FOXN4Q96NZ1 517 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 MED29Q9NX70 200 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 FKBP7Q9Y680 259 aa12.44□□□□□ -0.42
VMP1-206ENST00000587945 IGHV2OR16-5A0A0B4J2B6 119 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 SLC35F4A4IF30 521 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 RNF212BA8MTL3 300 aa12.43□□□□□ -0.42
VMP1-206ENST00000587945 VWC2LB2RUY7 222 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms