RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 C1DQ13901 141 aaKnown RBP12.14□□□□□ -0.47
DNMT1-213ENST00000587604 DAG1Q14118 895 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 TRIP10Q15642 601 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 CEACAM16Q2WEN9 425 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 MEX3DQ86XN8 651 aaKnown RBP12.14□□□□□ -0.47
DNMT1-213ENST00000587604 CDK20Q8IZL9 346 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 SLC35B4Q969S0 331 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 ZNF837Q96EG3 531 aaPredicted RBP12.14□□□□□ -0.47
DNMT1-213ENST00000587604 TMEM19Q96HH6 336 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 TPT1P8Q9HAU6 139 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 USP22Q9UPT9 525 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 CMAHPQ9Y471 501 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 ZNF99A8MXY4 864 aaPredicted RBP12.13□□□□□ -0.47
DNMT1-213ENST00000587604 AIM2O14862 343 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 SLC22A3O75751 556 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 ANP32DO95626 131 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 NR4A1P22736 598 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 EPHA3P29320 983 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 EVX1P49640 407 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 BST1Q10588 318 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 SNTB2Q13425 540 aaKnown RBP12.13□□□□□ -0.47
DNMT1-213ENST00000587604 MPP2Q14168 576 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 KRT71Q3SY84 523 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 ZNF311Q5JNZ3 666 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 RPS26P11Q5JNZ5 115 aaPredicted RBP12.13□□□□□ -0.47
DNMT1-213ENST00000587604 C6orf89Q6UWU4 347 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 MDP1Q86V88 176 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 PIK3C3Q8NEB9 887 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 WDR55Q9H6Y2 383 aaPredicted RBP12.13□□□□□ -0.47
DNMT1-213ENST00000587604 C12orf10Q9HB07 376 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 NOX3Q9HBY0 568 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 BCL2L10Q9HD36 194 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 SEC14L4Q9UDX3 406 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 METRNQ9UJH8 293 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 WNK2Q9Y3S1 2297 aa12.13□□□□□ -0.47
DNMT1-213ENST00000587604 A0A0A6YYJ9 748 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 TRPC5OSA6NMA1 111 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 B4DSR2 109 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 SLCO1B7G3V0H7 640 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 LYNX1G3V0Z9 82 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 HDAC3O15379 428 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 AKAP8O43823 692 aaKnown RBP12.12□□□□□ -0.47
DNMT1-213ENST00000587604 LYNX1P0DP58 116 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 IDO1P14902 403 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 CAPZA2P47755 286 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 HOXC5Q00444 222 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 IL1RL1Q01638 556 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 PDCD4Q53EL6 469 aaKnown RBP12.12□□□□□ -0.47
DNMT1-213ENST00000587604 FAM69AQ5T7M9 428 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 KRT80Q6KB66 452 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 C5orf46Q6UWT4 87 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 H1FNTQ75WM6 255 aaPredicted RBP12.12□□□□□ -0.47
DNMT1-213ENST00000587604 NET1Q7Z628 596 aaPredicted RBP12.12□□□□□ -0.47
DNMT1-213ENST00000587604 TMEM123Q8N131 208 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 TAAR8Q969N4 342 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 ITCHQ96J02 903 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 OR2M2Q96R28 347 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 MS4A5Q9H3V2 200 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 RMND5AQ9H871 391 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 B3GNT2Q9NY97 397 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 REV1Q9UBZ9 1251 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 SPEF1Q9Y4P9 236 aa12.12□□□□□ -0.47
DNMT1-213ENST00000587604 M0R082 166 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 SYNGR3O43761 229 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 ZNF35P13682 527 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 RUNX1T1Q06455 604 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 CCNIQ14094 377 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 SLC9B1Q4ZJI4 515 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 C12orf54Q6X4T0 127 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 DEF8Q6ZN54 512 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 RINLQ6ZS11 566 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 MSANTD1Q6ZTZ1 278 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 MREGQ8N565 214 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.11□□□□□ -0.47
DNMT1-213ENST00000587604 LSMEM1Q8N8F7 131 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 ZNF417Q8TAU3 575 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 ZFAND2BQ8WV99 257 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 SLC38A4Q969I6 547 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 MRPL24Q96A35 216 aaKnown RBP12.11□□□□□ -0.47
DNMT1-213ENST00000587604 VPS33AQ96AX1 596 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 LRR1Q96L50 414 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 ZNF587Q96SQ5 575 aaPredicted RBP12.11□□□□□ -0.47
DNMT1-213ENST00000587604 MRPL37Q9BZE1 423 aaKnown RBP12.11□□□□□ -0.47
DNMT1-213ENST00000587604 TPK1Q9H3S4 243 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 OCEL1Q9H607 264 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 KCNK9Q9NPC2 374 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 RPS6KB2Q9UBS0 482 aa12.11□□□□□ -0.47
DNMT1-213ENST00000587604 TRAV36DV7A0A075B6V5 113 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 MS4A18H0YCH9 400 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 M0R233 179 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 M0R3G1 203 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 TRAF3IP2O43734 574 aaPredicted RBP12.1□□□□□ -0.47
DNMT1-213ENST00000587604 SEC14L2O76054 403 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 HLA-HP01893 362 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 GRPRP30550 384 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 GLRXP35754 106 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 MFSD13AQ14CX5 517 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 RGNQ15493 299 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 MSMPQ1L6U9 139 aa12.1□□□□□ -0.47
DNMT1-213ENST00000587604 GSG1Q2KHT4 349 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms