RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 C16orf89Q6UX73 402 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 FKBP9P1Q75LS8 142 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 PXKQ7Z7A4 578 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 FITM2Q8N6M3 262 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 CCDC197Q8NCU1 140 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 ANKK1Q8NFD2 765 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 HS6ST2Q96MM7 605 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 LINC00470Q9BZP3 86 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 NANSQ9NR45 359 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 EGFL7Q9UHF1 273 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 RPS6KA6Q9UK32 745 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 ADAM21Q9UKJ8 722 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 ITGB1BP2Q9UKP3 347 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 A4GNTQ9UNA3 340 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 PLEKHA6Q9Y2H5 1048 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 VPS13CQ709C8 3753 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 RAI1Q7Z5J4 1906 aaPredicted RBP11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 SLC43A1O75387 559 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 OR6A2O95222 327 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 CH25HO95992 272 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 HPRP00739 348 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 HIST1H2ABP04908 130 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 ADORA3P0DMS8 318 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 HSD17B1P14061 328 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 NCK1P16333 377 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 HOXC12P31275 282 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 IST1P53990 364 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 FOXG1P55316 489 aaPredicted RBP11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 MXRA7P84157 204 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 SLC25A3Q00325 362 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 POU3F1Q03052 451 aaPredicted RBP11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 FXNQ16595 210 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 SPATS1Q496A3 300 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 NCMAPQ5T1S8 102 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 C9orf135Q5VTT2 229 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 GLYATQ6IB77 296 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 SEZ6L2Q6UXD5 910 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 ZNF704Q6ZNC4 412 aaPredicted RBP11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 HIST3H2AQ7L7L0 130 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 NKAIN4Q8IVV8 208 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 RNF148Q8N7C7 305 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 PIK3C3Q8NEB9 887 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 TMEM255BQ8WV15 326 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 TMEM239Q8WW34 195 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 HIST1H2ACQ93077 130 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 MBD6Q96DN6 1003 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 BOD1Q96IK1 185 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 HSH2DQ96JZ2 352 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 ALKBH3Q96Q83 286 aaPredicted RBP11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 TMEM204Q9BSN7 226 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 GORASP2Q9H8Y8 452 aa11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 MEPEQ9NQ76 525 aaPredicted RBP11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 CCM2LQ9NUG4 571 aaPredicted RBP11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 SAMD4AQ9UPU9 718 aaKnown RBP11.69□□□□□ -0.54
SMARCA4-210ENST00000586892 HTR3EA5X5Y0 456 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 RPL36A-HNRNPH2H7BZ11 118 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 UPK3AO75631 287 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 ATE1O95260 518 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 ASAH2BP0C7U1 165 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 UMPSP11172 480 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 HLA-DOBP13765 273 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 AHCYP23526 432 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 UGT2B15P54855 530 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 SH3BGRP55822 239 aaPredicted RBP11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 ZP4Q12836 540 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 ACKR1Q16570 336 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 HMBOX1Q6NT76 420 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 C20orf204Q6ZNR8 217 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 OFCC1Q8IZS5 231 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 TMEM123Q8N131 208 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 OR52N5Q8NH56 324 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 OR2M2Q96R28 347 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 CDRT15Q96T59 188 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 FOXC2Q99958 501 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 FNDC11Q9BVV2 318 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 UBTD1Q9HAC8 227 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 SLC17A5Q9NRA2 495 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 DCAF13Q9NV06 445 aaKnown RBP11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 MAGEL2Q9UJ55 1249 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 AMDHD2Q9Y303 409 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 MED31Q9Y3C7 131 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 RNF115Q9Y4L5 304 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 MAGED1Q9Y5V3 778 aaPredicted RBP11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 SNX13Q9Y5W8 968 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 SLC25A15Q9Y619 301 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 DSCAMO60469 2012 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 ITPR3Q14573 2671 aa11.68□□□□□ -0.54
SMARCA4-210ENST00000586892 CD3EP07766 207 aa11.67□□□□□ -0.54
SMARCA4-210ENST00000586892 CDH2P19022 906 aaPredicted RBP11.67□□□□□ -0.54
SMARCA4-210ENST00000586892 CD53P19397 219 aa11.67□□□□□ -0.54
SMARCA4-210ENST00000586892 TCN1P20061 433 aaPredicted RBP11.67□□□□□ -0.54
SMARCA4-210ENST00000586892 ART1P52961 327 aa11.67□□□□□ -0.54
SMARCA4-210ENST00000586892 ROR2Q01974 943 aaKnown RBP11.67□□□□□ -0.54
SMARCA4-210ENST00000586892 BSPH1Q075Z2 132 aa11.67□□□□□ -0.54
SMARCA4-210ENST00000586892 LGALS3BPQ08380 585 aa11.67□□□□□ -0.54
SMARCA4-210ENST00000586892 TRAM2Q15035 370 aa11.67□□□□□ -0.54
SMARCA4-210ENST00000586892 TESK1Q15569 626 aa11.67□□□□□ -0.54
SMARCA4-210ENST00000586892 KLHL17Q6TDP4 642 aa11.67□□□□□ -0.54
SMARCA4-210ENST00000586892 KLHL24Q6TFL4 600 aa11.67□□□□□ -0.54
SMARCA4-210ENST00000586892 TMEM108Q6UXF1 575 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms