RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 AIREO43918 545 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 TRIM3O75382 744 aaPredicted RBP9.39□□□□□ -0.91
LIG3-203ENST00000585370 OR6A2O95222 327 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 PRKAR1AP10644 381 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 HIST1H1CP16403 213 aaKnown RBP9.39□□□□□ -0.91
LIG3-203ENST00000585370 SLC2A5P22732 501 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 SDHAP31040 664 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 DLSTP36957 453 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 TGFBR2P37173 567 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 LIPAP38571 399 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 AQP2P41181 271 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 RPS5P46782 204 aaKnown RBP9.39□□□□□ -0.91
LIG3-203ENST00000585370 CENPAP49450 140 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 CTXN1P60606 82 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 ACTC1P68032 377 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 ACTA1P68133 377 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 BDH1Q02338 343 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 LTBQ06643 244 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 ZP4Q12836 540 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 DYNC1I2Q13409 638 aaKnown RBP9.39□□□□□ -0.91
LIG3-203ENST00000585370 GPR50Q13585 617 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 PON3Q15166 354 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 GLYR1Q49A26 553 aaPredicted RBP9.39□□□□□ -0.91
LIG3-203ENST00000585370 IL20RBQ6UXL0 311 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 JAZF1Q86VZ6 243 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 PLCZ1Q86YW0 608 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 KLHL36Q8N4N3 616 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 FADS6Q8N9I5 356 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 SCAIQ8N9R8 606 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 POMGNT2Q8NAT1 580 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 OR2M3Q8NG83 312 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 OR4K17Q8NGC6 315 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 OR52E2Q8NGJ4 325 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 SLC25A43Q8WUT9 341 aaPredicted RBP9.39□□□□□ -0.91
LIG3-203ENST00000585370 OTULINQ96BN8 352 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 ZBTB8AQ96BR9 441 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 MOGAT1Q96PD6 335 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 DDOQ99489 341 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 KATNB1Q9BVA0 655 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 NAA50Q9GZZ1 169 aaKnown RBP9.39□□□□□ -0.91
LIG3-203ENST00000585370 SH2D2AQ9NP31 389 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 SACM1LQ9NTJ5 587 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 P4HTMQ9NXG6 502 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 MRPL39Q9NYK5 338 aaKnown RBP9.39□□□□□ -0.91
LIG3-203ENST00000585370 GRHPRQ9UBQ7 328 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 SEC14L4Q9UDX3 406 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 TEKT2Q9UIF3 430 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 TUBD1Q9UJT1 453 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 FBXL4Q9UKA2 621 aa9.39□□□□□ -0.91
LIG3-203ENST00000585370 CAB39Q9Y376 341 aaPredicted RBP9.39□□□□□ -0.91
LIG3-203ENST00000585370 USP9YO00507 2555 aaPredicted RBP9.38□□□□□ -0.91
LIG3-203ENST00000585370 USP9XQ93008 2570 aaPredicted RBP9.38□□□□□ -0.91
LIG3-203ENST00000585370 J3QRE1 110 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 FZD7O75084 574 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 RENP00797 406 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 HSMCR30P0CW71 290 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 F8A1P23610 371 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 PAX7P23759 505 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 PSMA1P25786 263 aaKnown RBP9.38□□□□□ -0.91
LIG3-203ENST00000585370 PCSK6P29122 969 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 SERPINB10P48595 397 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 DIO1P49895 249 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 ETV1P50549 477 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 BLVRAP53004 296 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 RPS7P62081 194 aaKnown RBP9.38□□□□□ -0.91
LIG3-203ENST00000585370 ERVK-25P63136 954 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 RPL18Q07020 188 aaKnown RBP9.38□□□□□ -0.91
LIG3-203ENST00000585370 TPBGQ13641 420 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 CRMP1Q14194 572 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 GGTLC2Q14390 218 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 DGUOKQ16854 277 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 PLPPR5Q32ZL2 321 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 KLHL12Q53G59 568 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 USP43Q70EL4 1123 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 ADCK1Q86TW2 530 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 NPEPL1Q8NDH3 523 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 KBTBD8Q8NFY9 601 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 OR4K13Q8NH42 304 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 MOSPD2Q8NHP6 518 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 ZNF524Q96C55 264 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 C1GALT1C1Q96EU7 318 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 TMEM41AQ96HV5 264 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 FER1L6-AS2Q96M78 137 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 OR5M11Q96RB7 305 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 COQ7Q99807 217 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 PTDSS2Q9BVG9 487 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 NMNAT2Q9BZQ4 307 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 OR51V1Q9H2C8 321 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 GALNT9Q9HCQ5 603 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 ZNF71Q9NQZ8 489 aaPredicted RBP9.38□□□□□ -0.91
LIG3-203ENST00000585370 INIPQ9NRY2 104 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 ERVK13-1Q9NX77 482 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 CLEC2DQ9UHP7 191 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 NOX1Q9Y5S8 564 aa9.38□□□□□ -0.91
LIG3-203ENST00000585370 A0A1W2PPW3 197 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 DAPL1A0PJW8 107 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 CCDC182A6NF36 153 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 A6NIZ1 184 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 NPIPB13A6NJU9 1138 aa9.37□□□□□ -0.91
LIG3-203ENST00000585370 FAM183AA6NL82 134 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms