RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 SCAIQ8N9R8 606 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 PROX1Q92786 737 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 ARHGDIGQ99819 225 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 KCNS3Q9BQ31 491 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 TMEM43Q9BTV4 400 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 FAM107BQ9H098 131 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 MOV10Q9HCE1 1003 aaKnown RBP10.85□□□□□ -0.67
SS18-225ENST00000585121 SAR1AQ9NR31 198 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 CAPN7Q9Y6W3 813 aa10.85□□□□□ -0.67
SS18-225ENST00000585121 LOC100653049A0A140TA62 436 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 CPSF4LA6NMK7 179 aaKnown RBP10.84□□□□□ -0.67
SS18-225ENST00000585121 OVOL3O00110 214 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 SLC22A2O15244 555 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 CHP2O43745 196 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 KRT34O76011 436 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 HOXB1P14653 301 aaPredicted RBP10.84□□□□□ -0.67
SS18-225ENST00000585121 FABP6P51161 128 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 ROR2Q01974 943 aaKnown RBP10.84□□□□□ -0.67
SS18-225ENST00000585121 PGGHGQ32M88 737 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 HIKESHIQ53FT3 197 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 ENTPD8Q5MY95 495 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 TTC33Q6PID6 262 aaPredicted RBP10.84□□□□□ -0.67
SS18-225ENST00000585121 CCDC80Q76M96 950 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 SNX32Q86XE0 403 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 PIK3C3Q8NEB9 887 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 ANKK1Q8NFD2 765 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 OR6T1Q8NGN1 323 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 OR1K1Q8NGR3 316 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 VANGL1Q8TAA9 524 aaPredicted RBP10.84□□□□□ -0.67
SS18-225ENST00000585121 BOD1Q96IK1 185 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 ADAD1Q96M93 576 aaKnown RBP10.84□□□□□ -0.67
SS18-225ENST00000585121 HS6ST2Q96MM7 605 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 ALKBH3Q96Q83 286 aaPredicted RBP10.84□□□□□ -0.67
SS18-225ENST00000585121 DHRS9Q9BPW9 319 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 ELAC2Q9BQ52 826 aaKnown RBP10.84□□□□□ -0.67
SS18-225ENST00000585121 TRAF4Q9BUZ4 470 aaPredicted RBP10.84□□□□□ -0.67
SS18-225ENST00000585121 GRIP2Q9C0E4 1043 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 BARX1Q9HBU1 254 aaPredicted RBP10.84□□□□□ -0.67
SS18-225ENST00000585121 B3GAT2Q9NPZ5 323 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 SEC14L4Q9UDX3 406 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 NOX1Q9Y5S8 564 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 ATP23Q9Y6H3 246 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 NF1P21359 2839 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 NIPBLQ6KC79 2804 aaeCLIP10.84□□□□□ -0.67
SS18-225ENST00000585121 TRAPPC13A5PLN9 417 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 TRIM64A6NGJ6 449 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 TRIM64BA6NI03 449 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 ZNF726A6NNF4 738 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 SMAD7O15105 426 aaKnown RBP10.84□□□□□ -0.67
SS18-225ENST00000585121 TPST2O60704 377 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 UPK3AO75631 287 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 OR6A2O95222 327 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 MT-ATP6P00846 226 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 BGLAPP02818 100 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 BMP4P12644 408 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 CD247P20963 164 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 CDKN1AP38936 164 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 PUDPQ08623 228 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 VEZF1Q14119 521 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 TBRG1Q3YBR2 411 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 RABL3Q5HYI8 236 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 CGB2Q6NT52 195 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 ZNF544Q6NX49 715 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 ANKRD16Q6P6B7 361 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 SPATA21Q7Z572 469 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 DTX2Q86UW9 622 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 CCDC197Q8NCU1 140 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 GPR32P1Q8NGA4 272 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 MAGEE2Q8TD90 523 aaPredicted RBP10.84□□□□□ -0.67
SS18-225ENST00000585121 ADAMTS16Q8TE57 1224 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 TAMM41Q96BW9 452 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 MPP4Q96JB8 637 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 COX4I2Q96KJ9 171 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 WFDC6Q9BQY6 131 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 CBLN4Q9NTU7 201 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 MRPL39Q9NYK5 338 aaKnown RBP10.84□□□□□ -0.67
SS18-225ENST00000585121 B3GAT1Q9P2W7 334 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 BAG5Q9UL15 447 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 AP3M1Q9Y2T2 418 aa10.84□□□□□ -0.67
SS18-225ENST00000585121 RAI1Q7Z5J4 1906 aaPredicted RBP10.83□□□□□ -0.68
SS18-225ENST00000585121 E7EQL1 145 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 MS4A18H0YCH9 400 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 RPL36A-HNRNPH2H7BZ11 118 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 EBAG9O00559 213 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 ZNF432O94892 652 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 HIST1H2ABP04908 130 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 AHCYP23526 432 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 TTKP33981 857 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 GZMMP51124 257 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 SLC25A3Q00325 362 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 LGALS3BPQ08380 585 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 CLEC12BQ2HXU8 276 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 MS4A18Q3C1V0 323 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 HIST3H2AQ7L7L0 130 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 CALHM3Q86XJ0 350 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 MUC15Q8N387 334 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 OR5J2Q8NH18 312 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 BCL2L2Q92843 193 aaPredicted RBP10.83□□□□□ -0.68
SS18-225ENST00000585121 HIST1H2ACQ93077 130 aa10.83□□□□□ -0.68
SS18-225ENST00000585121 SLC41A3Q96GZ6 507 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms