RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	IGKV3-15	P01624	115 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	CBR1	P16152	277 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	GRPR	P30550	384 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	POLR2J	P52435	117 aa	Known RBP	13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	SNTB2	Q13425	540 aa	Known RBP	13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	C3orf36	Q3SXR2	165 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	KRT80	Q6KB66	452 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	MAVS	Q7Z434	540 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	CDK20	Q8IZL9	346 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	NUP37	Q8NFH4	326 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	BBS10	Q8TAM1	723 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	TAAR8	Q969N4	342 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	OXGR1	Q96P68	337 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	SNX18	Q96RF0	628 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	TPK1	Q9H3S4	243 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	ZNF442	Q9H7R0	627 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	CRLF2	Q9HC73	371 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732		A0A1B0GWA3	101 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	LYNX1	G3V0Z9	82 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	RPL36A-HNRNPH2	H7BZ11	118 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732		M0R3G1	203 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	UBD	O15205	165 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	ERCC1	P07992	297 aa	Predicted RBP	13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	LYNX1	P0DP58	116 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	HOXB1	P14653	301 aa	Predicted RBP	13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	PAX7	P23759	505 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	APEX1	P27695	318 aa	Known RBP	13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	HTR2A	P28223	471 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	DAG1	Q14118	895 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	RGN	Q15493	299 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	ADRM1	Q16186	407 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	PHYHD1	Q5SRE7	291 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	MSANTD1	Q6ZTZ1	278 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	ZNF540	Q8NDQ6	660 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	PIK3C3	Q8NEB9	887 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	NFKBID	Q8NI38	313 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	CKAP2	Q8WWK9	683 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	SLC38A4	Q969I6	547 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	MAEL	Q96JY0	434 aa	Known RBP	13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	OR2M2	Q96R28	347 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	DOK1	Q99704	481 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	PAIP1	Q9H074	479 aa	Known RBP	13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	NOX3	Q9HBY0	568 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	A4GALT	Q9NPC4	353 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	SDR39U1	Q9NRG7	319 aa	Predicted RBP	13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	THUMPD1	Q9NXG2	353 aa	Known RBP	13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	PCDHB14	Q9Y5E9	798 aa		13.1	□□□□□ -0.31
SREBF1-222	ENST00000583732	IGKV1D-42	A0A075B6H8	117 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	TMEM129	A0AVI4	362 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	VSTM5	A8MXK1	200 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	SLCO1B7	G3V0H7	640 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	CLIC1	O00299	241 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	TRAF3IP2	O43734	574 aa	Predicted RBP	13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	AKAP8	O43823	692 aa	Known RBP	13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	ADRA2A	P08913	450 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	CD79A	P11912	226 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	IFNGR1	P15260	489 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	NQO1	P15559	274 aa	Known RBP	13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	THBS2	P35442	1172 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	ARR3	P36575	388 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	CHN2	P52757	468 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	CCNI	Q14094	377 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	TRIP10	Q15642	601 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	ALG10B	Q5I7T1	473 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	FAM69A	Q5T7M9	428 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	COMTD1	Q86VU5	262 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	UEVLD	Q8IX04	471 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	MIER2	Q8N344	545 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	FAM169B	Q8N8A8	192 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	NEU4	Q8WWR8	484 aa	Predicted RBP	13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	GTF2H4	Q92759	462 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	ANKRD27	Q96NW4	1050 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	EMC6	Q9BV81	110 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	RAD21L1	Q9H4I0	556 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	MOV10	Q9HCE1	1003 aa	Known RBP	13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	BCL2L10	Q9HD36	194 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	PRDM4	Q9UKN5	801 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	USP22	Q9UPT9	525 aa		13.09	□□□□□ -0.31
SREBF1-222	ENST00000583732	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.08	□□□□□ -0.31	7e-9	■■■□□ 14.7
SREBF1-222	ENST00000583732	TRAV36DV7	A0A075B6V5	113 aa		13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	ZNF99	A8MXY4	864 aa	Predicted RBP	13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	OR2T1	O43869	369 aa		13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	LILRA1	O75019	489 aa		13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	SERPINI2	O75830	405 aa		13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	HPR	P00739	348 aa		13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	HLA-H	P01893	362 aa		13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	C8B	P07358	591 aa		13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	IGFBP1	P08833	259 aa	Predicted RBP	13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	HLA-DOB	P13765	273 aa		13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	SRP14	P37108	136 aa	Known RBP	13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	NCALD	P61601	193 aa		13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	PIGF	Q07326	219 aa		13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	SQLE	Q14534	574 aa		13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	GLIPR1L2	Q4G1C9	344 aa		13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	GCNT6	Q5T4J0	391 aa		13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	C6orf89	Q6UWU4	347 aa		13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	RINL	Q6ZS11	566 aa		13.08	□□□□□ -0.32
SREBF1-222	ENST00000583732	H1FNT	Q75WM6	255 aa	Predicted RBP	13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms