RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 RNF220Q5VTB9 566 aa13.9□□□□□ -0.18
SREBF1-221ENST00000583080 UGT2A3Q6UWM9 527 aa13.9□□□□□ -0.18
SREBF1-221ENST00000583080 LRRC34Q8IZ02 419 aa13.9□□□□□ -0.18
SREBF1-221ENST00000583080 GPR137CQ8N3F9 429 aa13.9□□□□□ -0.18
SREBF1-221ENST00000583080 ANKK1Q8NFD2 765 aa13.9□□□□□ -0.18
SREBF1-221ENST00000583080 MFSD8Q8NHS3 518 aa13.9□□□□□ -0.18
SREBF1-221ENST00000583080 STK35Q8TDR2 534 aa13.9□□□□□ -0.18
SREBF1-221ENST00000583080 KTI12Q96EK9 354 aaPredicted RBP13.9□□□□□ -0.18
SREBF1-221ENST00000583080 SYT3Q9BQG1 590 aa13.9□□□□□ -0.18
SREBF1-221ENST00000583080 RACGAP1Q9H0H5 632 aa13.9□□□□□ -0.18
SREBF1-221ENST00000583080 CMAHPQ9Y471 501 aa13.9□□□□□ -0.18
SREBF1-221ENST00000583080 SYNGR3O43761 229 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 NCR1O76036 304 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 HLA-HP01893 362 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 MSMBP08118 114 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 ETFAP13804 333 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 ALDH3B1P43353 468 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 SEC24CP53992 1094 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 MAD2L1BPQ15013 274 aaPredicted RBP13.89□□□□□ -0.19
SREBF1-221ENST00000583080 SHQ1Q6PI26 577 aaKnown RBP13.89□□□□□ -0.19
SREBF1-221ENST00000583080 LRP11Q86VZ4 500 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 TMEM123Q8N131 208 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 YIPF5Q969M3 257 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 LRRC37BQ96QE4 947 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 OR2M2Q96R28 347 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 OR52E6Q96RD3 313 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 AIG1Q9NVV5 245 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 TREM2Q9NZC2 230 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 MYEF2Q9P2K5 600 aaKnown RBP13.89□□□□□ -0.19
SREBF1-221ENST00000583080 P2RX2Q9UBL9 471 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 REV1Q9UBZ9 1251 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 USP22Q9UPT9 525 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 RAP2CQ9Y3L5 183 aa13.89□□□□□ -0.19
SREBF1-221ENST00000583080 ZNF99A8MXY4 864 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-221ENST00000583080 M0R082 166 aa13.88□□□□□ -0.19
SREBF1-221ENST00000583080 M0R3G1 203 aa13.88□□□□□ -0.19
SREBF1-221ENST00000583080 TRAF3IP2O43734 574 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-221ENST00000583080 FZD7O75084 574 aa13.88□□□□□ -0.19
SREBF1-221ENST00000583080 GAAP10253 952 aa13.88□□□□□ -0.19
SREBF1-221ENST00000583080 GTF2E2P29084 291 aaKnown RBP13.88□□□□□ -0.19
SREBF1-221ENST00000583080 RPL14P50914 215 aaKnown RBP13.88□□□□□ -0.19
SREBF1-221ENST00000583080 CARD17Q5XLA6 110 aa13.88□□□□□ -0.19
SREBF1-221ENST00000583080 OGFOD2Q6N063 350 aa13.88□□□□□ -0.19
SREBF1-221ENST00000583080 C1orf229Q6ZS94 237 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-221ENST00000583080 C3orf56Q8N813 242 aa13.88□□□□□ -0.19
SREBF1-221ENST00000583080 ZNF417Q8TAU3 575 aa13.88□□□□□ -0.19
SREBF1-221ENST00000583080 ZNF418Q8TF45 676 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-221ENST00000583080 SLC38A5Q8WUX1 472 aa13.88□□□□□ -0.19
SREBF1-221ENST00000583080 ZMYND19Q96E35 227 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-221ENST00000583080 ZNF75AQ96N20 296 aa13.88□□□□□ -0.19
SREBF1-221ENST00000583080 OXGR1Q96P68 337 aa13.88□□□□□ -0.19
SREBF1-221ENST00000583080 ZNF587Q96SQ5 575 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-221ENST00000583080 ZNF275Q9NSD4 429 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-221ENST00000583080 B3GNT2Q9NY97 397 aa13.88□□□□□ -0.19
SREBF1-221ENST00000583080 FZR1Q9UM11 496 aa13.88□□□□□ -0.19
SREBF1-221ENST00000583080 GRIP1Q9Y3R0 1128 aa13.88□□□□□ -0.19
SREBF1-221ENST00000583080 TMEM89A2RUT3 159 aa13.87□□□□□ -0.19
SREBF1-221ENST00000583080 CD79AP11912 226 aa13.87□□□□□ -0.19
SREBF1-221ENST00000583080 ACHEP22303 614 aa13.87□□□□□ -0.19
SREBF1-221ENST00000583080 CRISP3P54108 245 aa13.87□□□□□ -0.19
SREBF1-221ENST00000583080 HILS1P60008 231 aa13.87□□□□□ -0.19
SREBF1-221ENST00000583080 IFFO1Q0D2I5 559 aa13.87□□□□□ -0.19
SREBF1-221ENST00000583080 C1DQ13901 141 aaKnown RBP13.87□□□□□ -0.19
SREBF1-221ENST00000583080 GTDC1Q4AE62 458 aa13.87□□□□□ -0.19
SREBF1-221ENST00000583080 SLC9B1Q4ZJI4 515 aa13.87□□□□□ -0.19
SREBF1-221ENST00000583080 WDFY1Q8IWB7 410 aa13.87□□□□□ -0.19
SREBF1-221ENST00000583080 PIK3C3Q8NEB9 887 aa13.87□□□□□ -0.19
SREBF1-221ENST00000583080 IL17RDQ8NFM7 739 aa13.87□□□□□ -0.19
SREBF1-221ENST00000583080 GCDHQ92947 438 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-221ENST00000583080 TMEM19Q96HH6 336 aa13.87□□□□□ -0.19
SREBF1-221ENST00000583080 SPATA9Q9BWV2 254 aa13.87□□□□□ -0.19
SREBF1-221ENST00000583080 MEAF6Q9HAF1 191 aa13.87□□□□□ -0.19
SREBF1-221ENST00000583080 PNPOQ9NVS9 261 aa13.87□□□□□ -0.19
SREBF1-221ENST00000583080 IGKV1D-42A0A075B6H8 117 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 SDHDO14521 159 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 AIM2O14862 343 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 KRT75O95678 551 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 HPRP00739 348 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 AVPP01185 164 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 TFP02787 698 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 ZNF35P13682 527 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 B4GALT1P15291 398 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 ZNF14P17017 642 aaPredicted RBP13.86□□□□□ -0.19
SREBF1-221ENST00000583080 EPHA1P21709 976 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 CBLP22681 906 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 GRPRP30550 384 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 CRATP43155 626 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 SLC1A6P48664 564 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 EVX1P49640 407 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 DSTNP60981 165 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 LMO4P61968 165 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 PIGFQ07326 219 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 LARS2Q15031 903 aaKnown RBP13.86□□□□□ -0.19
SREBF1-221ENST00000583080 GSG1Q2KHT4 349 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 PEG10Q86TG7 708 aaKnown RBP13.86□□□□□ -0.19
SREBF1-221ENST00000583080 CCDC36Q8IYA8 594 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 OR51F2Q8NH61 342 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 FAM216AQ8WUB2 273 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 RDH5Q92781 318 aa13.86□□□□□ -0.19
SREBF1-221ENST00000583080 TAAR8Q969N4 342 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms