RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 BTN3A3O00478 584 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 MFN2O95140 757 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 OXSR1O95747 527 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 AP2A1O95782 977 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 DCNP07585 359 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 CELP19835 753 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 HMGB2P26583 209 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 CA8P35219 290 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 DDOSTP39656 456 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 FGF8P55075 233 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 TNFRSF17Q02223 184 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 KLRC3Q07444 240 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 VGLL4Q14135 290 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 FZD2Q14332 565 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 OXA1LQ15070 435 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 INAQ16352 499 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 ZNF880Q6PDB4 577 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 CES3Q6UWW8 571 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 ZNF573Q86YE8 665 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 MYOCDQ8IZQ8 938 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 OR5W2Q8NH69 310 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 CD300LFQ8TDQ1 290 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 CTNNBL1Q8WYA6 563 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 SECISBP2Q96T21 854 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 OMDQ99983 421 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 ECSITQ9BQ95 431 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 TUBGCP2Q9BSJ2 902 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 CAPS2Q9BXY5 557 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 WFDC1Q9HC57 220 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 TM9SF3Q9HD45 589 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 CTPS2Q9NRF8 586 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 MARCOQ9UEW3 520 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 PCSK1NQ9UHG2 260 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 ODF2LQ9ULJ1 636 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 MMP17Q9ULZ9 603 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 F11RQ9Y624 299 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 PHF3Q92576 2039 aaKnown RBP1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 CARMIL3Q8ND23 1372 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 A0A1W2PP18 115 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 TCRBV9S1A1TA0A576 114 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 A8MUI8 341 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 ATP5LO75964 103 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 CSF3P09919 207 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 GKN3PP0CG01 181 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 PNMTP11086 282 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 NCF1P14598 390 aaPredicted RBP1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 PAX7P23759 505 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 GDI1P31150 447 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 RDXP35241 583 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 CASP4P49662 377 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 C1orf61Q13536 156 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 SELPLGQ14242 412 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 ZBED5Q49AG3 693 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 COA6Q5JTJ3 125 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 C10orf120Q5SQS8 335 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 OR4D5Q8NGN0 318 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 OR10T2Q8NGX3 314 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 LRRC58Q96CX6 371 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 AURKBQ96GD4 344 aaPredicted RBP1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 RAB34Q9BZG1 259 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 RANBP3Q9H6Z4 567 aaPredicted RBP1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 CHRNA9Q9UGM1 479 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 MRPS33Q9Y291 106 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 MEMO1Q9Y316 297 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 PLA2R1Q13018 1463 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 ATP8B3O60423 1300 aa1.61□□□□□ -2.15
SMCHD1-206ENST00000581631 GPRASP1Q5JY77 1395 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 TRAV40A0A0B4J280 105 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 C7orf66A4D0T2 115 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 ZNF705GA8MUZ8 300 aaPredicted RBP1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 H3BNH8 94 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 RCBTB2O95199 551 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 BGLAPP02818 100 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 ADRA2AP08913 450 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 ZDHHC11BP0C7U3 371 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 IGHV3-43DP0DP04 118 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 OMGP23515 440 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 GYG1P46976 350 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 CACNG7P62955 275 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 KLHL30Q0D2K2 578 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 DUSP7Q16829 419 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 TATDN3Q17R31 274 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 SHISA6Q6ZSJ9 500 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 FAM92BQ6ZTR7 304 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 CCDC80Q76M96 950 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 GET4Q7L5D6 327 aaPredicted RBP1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 CCDC50Q8IVM0 306 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 ZNF679Q8IYX0 411 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 IPMKQ8NFU5 416 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 OR52H1Q8NGJ2 320 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 OR52P1PQ8NH57 321 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 ZNF461Q8TAF7 563 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 CCDC110Q8TBZ0 833 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 MAIP1Q8WWC4 291 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 UFD1Q92890 307 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 FGF14Q92915 247 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 EFHD2Q96C19 240 aaPredicted RBP1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 OXGR1Q96P68 337 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 OR2A5Q96R48 311 aa1.6□□□□□ -2.15
SMCHD1-206ENST00000581631 PLA2G12AQ9BZM1 189 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms