RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 C4AP0C0L4 1744 aa2.65□□□□□ -1.98
KPNB1-208ENST00000580019 DOT1LQ8TEK3 1739 aa2.65□□□□□ -1.98
KPNB1-208ENST00000580019 POLR3AO14802 1390 aaPredicted RBP2.65□□□□□ -1.98
KPNB1-208ENST00000580019 NUP155O75694 1391 aa2.65□□□□□ -1.98
KPNB1-208ENST00000580019 PALLDQ8WX93 1383 aa2.65□□□□□ -1.98
KPNB1-208ENST00000580019 IGHV2-70DA0A0C4DH43 119 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 TRBV7-9A0A0J9YWB2 115 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 A0A1W2PQ72 361 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 ZNF99A8MXY4 864 aaPredicted RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 C11orf98E9PRG8 122 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 K7ERI5 159 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 INPP4BO15327 924 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 GPAA1O43292 621 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 CHST1O43916 411 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 AIREO43918 545 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 EFNA2O43921 213 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 RAMP1O60894 148 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 MYO1DO94832 1006 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 PAK4O96013 591 aaPredicted RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 OAS1P00973 400 aaKnown RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 JCHAINP01591 159 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 IGHG4P01861 327 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 EDN1P05305 212 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 GLAP06280 429 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 ANXA5P08758 320 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 CT62P0C5K7 136 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 PLA2G2AP14555 144 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 GATA1P15976 413 aaPredicted RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 ABOP16442 354 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 POLR2EP19388 210 aaKnown RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 IL32P24001 234 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 EDNRAP25101 427 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 CALML3P27482 149 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 CD40LGP29965 261 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 GPR183P32249 361 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 FOXN2P32314 431 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 PCK1P35558 622 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 MMP12P39900 470 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 MAP3K8P41279 467 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 SLC1A1P43005 524 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 HAAOP46952 286 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 ART1P52961 327 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 TMEM50BP56557 158 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 MYL6P60660 151 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 ERVK-25P63136 954 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 GSTO1P78417 241 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 LCN2P80188 198 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 MRPS22P82650 360 aaKnown RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 CDR2Q01850 454 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 PLOD1Q02809 727 aaPredicted RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 RAB40BQ12829 278 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 DLG1Q12959 904 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 ORC2Q13416 577 aaPredicted RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 GCKRQ14397 625 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 NFATC4Q14934 902 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 CD226Q15762 336 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 CCDC6Q16204 474 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 NDUFA9Q16795 377 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 PAN3Q58A45 887 aaKnown RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 ZNF470Q6ECI4 717 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 CERS6Q6ZMG9 384 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 ZNF852Q6ZMS4 543 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 MOB2Q70IA6 237 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 CHMP1BQ7LBR1 199 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 NIPA1Q7RTP0 329 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 PID1Q7Z2X4 250 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 ISCA2Q86U28 154 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 PIGZQ86VD9 579 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 CYP4Z1Q86W10 505 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 IFNEQ86WN2 208 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 PLCZ1Q86YW0 608 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 MTURNQ8N3F0 131 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 KIR3DL3Q8N743 410 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 TTC29Q8NA56 475 aaPredicted RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 KBTBD8Q8NFY9 601 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 OR52I1Q8NGK6 324 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 OR5L2Q8NGL0 311 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 OR1K1Q8NGR3 316 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 PLPPR1Q8TBJ4 325 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 PCNPQ8WW12 178 aaKnown RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 HTR3CQ8WXA8 447 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 CACNG8Q8WXS5 425 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 SORCS1Q8WY21 1168 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 CDKL2Q92772 493 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 CCDC126Q96EE4 140 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 OR5B2Q96R09 309 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 ATP5SQ99766 215 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 SLC35A5Q9BS91 424 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 RBM4Q9BWF3 364 aaKnown RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 GBA3Q9H227 469 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 PRO3102Q9H379 93 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 UCK1Q9HA47 277 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 TMEM165Q9HC07 324 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 SAMSN1Q9NSI8 373 aaKnown RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 RBAKQ9NYW8 714 aaPredicted RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 ABCD2Q9UBJ2 740 aa2.65□□□□□ -1.99
KPNB1-208ENST00000580019 UXTQ9UBK9 157 aaPredicted RBP2.65□□□□□ -1.99
KPNB1-208ENST00000580019 KLK11Q9UBX7 282 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms