RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 CTXN1P60606 82 aa14.95□□□□□ -0.02
CDK5RAP3-215ENST00000579780 TMEM236Q5W0B7 351 aa14.95□□□□□ -0.02
CDK5RAP3-215ENST00000579780 GPR139Q6DWJ6 353 aa14.95□□□□□ -0.02
CDK5RAP3-215ENST00000579780 ACSM5Q6NUN0 579 aa14.95□□□□□ -0.02
CDK5RAP3-215ENST00000579780 PXKQ7Z7A4 578 aa14.95□□□□□ -0.02
CDK5RAP3-215ENST00000579780 IGFN1Q86VF2 1251 aa14.95□□□□□ -0.02
CDK5RAP3-215ENST00000579780 UEVLDQ8IX04 471 aa14.95□□□□□ -0.02
CDK5RAP3-215ENST00000579780 MARVELD2Q8N4S9 558 aa14.95□□□□□ -0.02
CDK5RAP3-215ENST00000579780 ZNF845Q96IR2 970 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-215ENST00000579780 SF3B5Q9BWJ5 86 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-215ENST00000579780 IMPAD1Q9NX62 359 aa14.95□□□□□ -0.02
CDK5RAP3-215ENST00000579780 MCTS1Q9ULC4 181 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-215ENST00000579780 ZNF175Q9Y473 711 aa14.95□□□□□ -0.02
CDK5RAP3-215ENST00000579780 NOX1Q9Y5S8 564 aa14.95□□□□□ -0.02
CDK5RAP3-215ENST00000579780 A0A1B0GTH9 108 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 A0A1W2PRG6 482 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 MS4A18H0YCH9 400 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 SURF4O15260 269 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 TRAF3IP2O43734 574 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 MPZL2O60487 215 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 SYNGR4O95473 234 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 IFNGP01579 166 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 F13BP05160 661 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 KLK2P20151 261 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 PCYT1AP49585 367 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 DAP3P51398 398 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 SLC16A1P53985 500 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 HSF1Q00613 529 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 MYBPC1Q00872 1141 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 POU3F1Q03052 451 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 SRYQ05066 204 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 C3AR1Q16581 482 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 MS4A18Q3C1V0 323 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 EMC4Q5J8M3 183 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 FAM205BPQ63HN1 556 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 HDDC2Q7Z4H3 204 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 CISD2Q8N5K1 135 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 LSM14AQ8ND56 463 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 RNF128Q8TEB7 428 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 TRUB1Q8WWH5 349 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 MUS81Q96NY9 551 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 OXGR1Q96P68 337 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 TSPAN32Q96QS1 320 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 UCN2Q96RP3 112 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 TXNIPQ9H3M7 391 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 CMC2Q9NRP2 79 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 TNFRSF10DQ9UBN6 386 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 ADAM18Q9Y3Q7 739 aa14.94□□□□□ -0.02
CDK5RAP3-215ENST00000579780 CYTIPO60759 359 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 RAMP1O60894 148 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 FCGR2AP12318 317 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 ZNF3P17036 446 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 ERVK-25P63136 954 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 IL5RAQ01344 420 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 TEKQ02763 1124 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 MED21Q13503 144 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 LY6DQ14210 128 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 MAD2L1BPQ15013 274 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 FCRLAQ7L513 359 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 CHMP1BQ7LBR1 199 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 FGD2Q7Z6J4 655 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 THAP5Q7Z6K1 395 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 ADGRE4PQ86SQ3 457 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 ADCK1Q86TW2 530 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 ENTHD1Q8IYW4 607 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 OR8J1Q8NGP2 316 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 ZPLD1Q8TCW7 415 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 FBLIM1Q8WUP2 373 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 SNRNP40Q96DI7 357 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 CNBD2Q96M20 576 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 ERMAPQ96PL5 475 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 TUBA1CQ9BQE3 449 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 FN3KQ9H479 309 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 TVP23BQ9NYZ1 205 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 KLHL21Q9UJP4 597 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 RNF6Q9Y252 685 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 IER3IP1Q9Y5U9 82 aa14.93□□□□□ -0.02
CDK5RAP3-215ENST00000579780 IGHV3-15A0A0B4J1V0 119 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 TEX13CA0A0J9YWL9 993 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 RIIAD1A6NNX1 92 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 ZNF716A6NP11 495 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 CLCA1A8K7I4 914 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 NPIPA2E9PIF3 369 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 NPIPA3F8WFD2 350 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 AKAP8O43823 692 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 WISP2O76076 250 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 PLGP00747 810 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 GABRB1P18505 474 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 NOS3P29474 1203 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 RPL27P61353 136 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 ISL1P61371 349 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 SNRPGP62308 76 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 CD47Q08722 323 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 TOP3AQ13472 1001 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 KRR1Q13601 381 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 SLC17A1Q14916 467 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 PDK3Q15120 406 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 PON3Q15166 354 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 SNAPC1Q16533 368 aa14.92□□□□□ -0.02
CDK5RAP3-215ENST00000579780 ACKR1Q16570 336 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms