RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 DIO1P49895 249 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 MAP2K6P52564 334 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 CTBP2P56545 445 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 KRTAP10-7P60409 375 aaPredicted RBP3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 RAC3P60763 192 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 ACTR3P61158 418 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 DGCR6Q14129 220 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 PDK3Q15120 406 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 PON3Q15166 354 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF74Q16587 644 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 MS4A18Q3C1V0 323 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 TMEM176BQ3YBM2 270 aaPredicted RBP3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 FBXL19-AS1Q494R0 122 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 MTX3Q5HYI7 312 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 ALG10BQ5I7T1 473 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 WLSQ5T9L3 541 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 RIPPLY2Q5TAB7 128 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 C1orf140Q5VVS0 124 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 HMBOX1Q6NT76 420 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF585AQ6P3V2 769 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 VWA1Q6PCB0 445 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 AAGABQ6PD74 315 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 TMPPEQ6ZT21 453 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 TMEM179BQ7Z7N9 219 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 RANBP3LQ86VV4 465 aaPredicted RBP3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 EPHX4Q8IUS5 362 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 P3H2Q8IVL5 708 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 AQP12AQ8IXF9 295 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 PM20D2Q8IYS1 436 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 UBQLNLQ8IYU4 475 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 CADM2Q8N3J6 435 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 LRRC17Q8N6Y2 441 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 TMEM99Q8N816 258 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 ADPRHL1Q8NDY3 354 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 PFN4Q8NHR9 129 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 MFSD8Q8NHS3 518 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 SLC7A13Q8TCU3 470 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 ABHD3Q8WU67 409 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 TMEM255BQ8WV15 326 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 CANT1Q8WVQ1 401 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 DNAJA4Q8WW22 397 aaPredicted RBP3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 PROX1Q92786 737 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 OSTF1Q92882 214 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 TAAR8Q969N4 342 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 FAM162AQ96A26 154 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 CCDC124Q96CT7 223 aaKnown RBP3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 NMD3Q96D46 503 aaKnown RBP3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 SLC47A1Q96FL8 570 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 TPD52L3Q96J77 140 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 MPP4Q96JB8 637 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 NSMCE2Q96MF7 247 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 SEPHS2Q99611 448 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 PSD2Q9BQI7 771 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 ENKD1Q9H0I2 346 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 ANKRD19PQ9H560 264 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 CALHM2Q9HA72 323 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 NMNAT1Q9HAN9 279 aaPredicted RBP3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 BCO1Q9HAY6 547 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 CCM2LQ9NUG4 571 aaPredicted RBP3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 ADPRHL2Q9NX46 363 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 KLHL13Q9P2N7 655 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 RHCGQ9UBD6 479 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 RPS6KA6Q9UK32 745 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 SLC7A7Q9UM01 511 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 SAMD4AQ9UPU9 718 aaKnown RBP3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 RNF6Q9Y252 685 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 TRAPPC4Q9Y296 219 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 HDGFL3Q9Y3E1 203 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 LYVE1Q9Y5Y7 322 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 V9GYQ6 96 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 ABCA12Q86UK0 2595 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 DSCAMO60469 2012 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 LRBAP50851 2863 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 TACC2O95359 2948 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 ANKRD17O75179 2603 aaKnown RBP3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 ROS1P08922 2347 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 TRAV36DV7A0A075B6V5 113 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 IGHV3-15A0A0B4J1V0 119 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 TRGV8A0A0C4DH27 118 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 A0A1B0GUH1 482 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 DHRS12A0PJE2 317 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 TMEM82A0PJX8 343 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 SH3PXD2BA1X283 911 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 SLC22A20A6NK97 555 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 AQP7P3A6NL99 342 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 ENO4A6NNW6 628 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 H0Y3Z8 333 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 C19orf84I3L1E1 186 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 PDLIM1O00151 329 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 EBAG9O00559 213 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 CCL21O00585 134 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 GSTA4O15217 222 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 LRRTM2O43300 516 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 ZG16O60844 167 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 FKBP6O75344 327 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 PTP4A3O75365 173 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF432O94892 652 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 CLDN1O95832 211 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 NUDT14O95848 222 aa3.35□□□□□ -1.87
SMARCE1-215ENST00000578995 IL18BPO95998 194 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms