RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 THAP10Q9P2Z0 257 aaPredicted RBP11.1□□□□□ -0.63
ERBB2-206ENST00000578373 ICKQ9UPZ9 632 aa11.1□□□□□ -0.63
ERBB2-206ENST00000578373 EMC9Q9Y3B6 208 aa11.1□□□□□ -0.63
ERBB2-206ENST00000578373 SCN2AQ99250 2005 aa11.1□□□□□ -0.63
ERBB2-206ENST00000578373 NUDT21O43809 227 aaKnown RBP11.1□□□□□ -0.63
ERBB2-206ENST00000578373 ATP1B1P05026 303 aa11.1□□□□□ -0.63
ERBB2-206ENST00000578373 PKLRP30613 574 aa11.1□□□□□ -0.63
ERBB2-206ENST00000578373 CASRP41180 1078 aa11.1□□□□□ -0.63
ERBB2-206ENST00000578373 CSNK1EP49674 416 aaKnown RBP11.1□□□□□ -0.63
ERBB2-206ENST00000578373 TSC22D1Q15714 1073 aa11.1□□□□□ -0.63
ERBB2-206ENST00000578373 CDKN3Q16667 212 aa11.1□□□□□ -0.63
ERBB2-206ENST00000578373 ARSKQ6UWY0 536 aa11.1□□□□□ -0.63
ERBB2-206ENST00000578373 UNQ6126/PRO20091Q6UXV3 157 aa11.1□□□□□ -0.63
ERBB2-206ENST00000578373 LINC00299Q6ZSB3 139 aa11.1□□□□□ -0.63
ERBB2-206ENST00000578373 RNF113BQ8IZP6 322 aaKnown RBP11.1□□□□□ -0.63
ERBB2-206ENST00000578373 SENP5Q96HI0 755 aaPredicted RBP11.1□□□□□ -0.63
ERBB2-206ENST00000578373 NECAB3Q96P71 396 aaPredicted RBP11.1□□□□□ -0.63
ERBB2-206ENST00000578373 OR2A14Q96R47 310 aa11.1□□□□□ -0.63
ERBB2-206ENST00000578373 A4GNTQ9UNA3 340 aa11.1□□□□□ -0.63
ERBB2-206ENST00000578373 PTPRFP10586 1907 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 KCNE1BA0A087WTH5 132 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 H7C417 338 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 PRAF2O60831 178 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 ZNF14P17017 642 aaPredicted RBP11.09□□□□□ -0.63
ERBB2-206ENST00000578373 TUBG1P23258 451 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 NFYAP23511 347 aaPredicted RBP11.09□□□□□ -0.63
ERBB2-206ENST00000578373 BTG2P78543 158 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 GLYATL3Q5SZD4 288 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 STEAP2Q8NFT2 490 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 KCTD12Q96CX2 325 aaKnown RBP11.09□□□□□ -0.63
ERBB2-206ENST00000578373 TMEM43Q9BTV4 400 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 CRB3Q9BUF7 120 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 SLC38A1Q9H2H9 487 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 APMAPQ9HDC9 416 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 FTSJ1Q9UET6 329 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 FBXL4Q9UKA2 621 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 CCL27Q9Y4X3 112 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 PRAMEF26H0Y7S4 382 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 CSF1P09603 554 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 GABRR1P24046 479 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 PRAMEF20Q5VT98 475 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 ZNF793Q6ZN11 406 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 CCDC190Q86UF4 302 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 ASB16Q96NS5 453 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 SPACA5Q96QH8 159 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 ZNF436Q9C0F3 470 aaPredicted RBP11.09□□□□□ -0.63
ERBB2-206ENST00000578373 OR51B6Q9H340 312 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 LMAN1LQ9HAT1 526 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 SERGEFQ9UGK8 458 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 NAP1L6A6NFF2 107 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 GPRIN2O60269 458 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 LCATP04180 440 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 PIPP12273 146 aaPredicted RBP11.09□□□□□ -0.63
ERBB2-206ENST00000578373 EMP2P54851 167 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 PPP2CBP62714 309 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 PPP2CAP67775 309 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 CAMK2DQ13557 499 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 UEVLDQ8IX04 471 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 FAM160A2Q8N612 972 aaPredicted RBP11.09□□□□□ -0.63
ERBB2-206ENST00000578373 SFXN2Q96NB2 322 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 PELOQ9BRX2 385 aaKnown RBP11.09□□□□□ -0.63
ERBB2-206ENST00000578373 EMC6Q9BV81 110 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 INPP5EQ9NRR6 644 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 REV1Q9UBZ9 1251 aa11.09□□□□□ -0.63
ERBB2-206ENST00000578373 SPTAN1Q13813 2472 aaKnown RBP11.09□□□□□ -0.63
ERBB2-206ENST00000578373 A0A0A6YYJ9 748 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 MEGF11A6BM72 1044 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 TP53I11O14683 189 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 NPC1O15118 1278 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 FADS1O60427 444 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 GPLD1P80108 840 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 KCNAB1Q14722 419 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 Q499Y3 187 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 P4HA3Q7Z4N8 544 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 PLXDC1Q8IUK5 500 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 SIRT6Q8N6T7 355 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 ZNF611Q8N823 705 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 OR4N2Q8NGD1 307 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 OR51S1Q8NGJ8 323 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 HOXB13Q92826 284 aaPredicted RBP11.08□□□□□ -0.63
ERBB2-206ENST00000578373 PNPLA2Q96AD5 504 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 SHDQ96IW2 340 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 ZNF587Q96SQ5 575 aaPredicted RBP11.08□□□□□ -0.63
ERBB2-206ENST00000578373 PLEK2Q9NYT0 353 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 HIF3AQ9Y2N7 669 aa11.08□□□□□ -0.63
ERBB2-206ENST00000578373 RIF1Q5UIP0 2472 aaKnown RBP11.08□□□□□ -0.64
ERBB2-206ENST00000578373 TMEM82A0PJX8 343 aa11.08□□□□□ -0.64
ERBB2-206ENST00000578373 GAAP10253 952 aa11.08□□□□□ -0.64
ERBB2-206ENST00000578373 PRKACAP17612 351 aa11.08□□□□□ -0.64
ERBB2-206ENST00000578373 GZMKP49863 264 aa11.08□□□□□ -0.64
ERBB2-206ENST00000578373 CAV2P51636 162 aa11.08□□□□□ -0.64
ERBB2-206ENST00000578373 RAP2BP61225 183 aa11.08□□□□□ -0.64
ERBB2-206ENST00000578373 HSD11B2P80365 405 aa11.08□□□□□ -0.64
ERBB2-206ENST00000578373 MEX3BQ6ZN04 569 aaKnown RBP11.08□□□□□ -0.64
ERBB2-206ENST00000578373 RHOUQ7L0Q8 258 aa11.08□□□□□ -0.64
ERBB2-206ENST00000578373 ZNF454Q8N9F8 522 aa11.08□□□□□ -0.64
ERBB2-206ENST00000578373 MAFIPQ8WZ33 124 aa11.08□□□□□ -0.64
ERBB2-206ENST00000578373 FCRL1Q96LA6 429 aa11.08□□□□□ -0.64
ERBB2-206ENST00000578373 AIFM2Q9BRQ8 373 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms