RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 RADILQ96JH8 1075 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 HS6ST2Q96MM7 605 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 TSPAN32Q96QS1 320 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 PRSS27Q9BQR3 290 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 CPPED1Q9BRF8 314 aaPredicted RBP3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF426Q9BUY5 554 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 EMC6Q9BV81 110 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 KATNB1Q9BVA0 655 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 C19orf24Q9BVV8 132 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 REPIN1Q9BWE0 567 aaKnown RBP3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 MRPL37Q9BZE1 423 aaKnown RBP3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 PIF1Q9H611 641 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 BARX1Q9HBU1 254 aaPredicted RBP3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 TMBIM4Q9HC24 238 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 NGBQ9NPG2 151 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 FANCFQ9NPI8 374 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 MEPEQ9NQ76 525 aaPredicted RBP3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 THAP1Q9NVV9 213 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 MED29Q9NX70 200 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 TAS2R5Q9NYW4 299 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 ZIM2Q9NZV7 527 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 MGAT4BQ9UQ53 548 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 AMDHD2Q9Y303 409 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 ATP23Q9Y6H3 246 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 A0A087WUJ7 227 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 A0A096LPI6 279 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 A0A0G2JPF8 293 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 HNRNPCL2B2RXH8 293 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 HNRNPCL3B7ZW38 293 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 M0R3H8 397 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 FBP2O00757 339 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 PLPP3O14495 311 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 LMX1BO60663 402 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 HNRNPCL1O60812 293 aaKnown RBP3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 VENTXO95231 258 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 IL6P05231 212 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 GPIP06744 558 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 TSPAN19P0C672 248 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 HNRNPCL4P0DMR1 293 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 IDO1P14902 403 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 ETS2P15036 469 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF23P17027 643 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF26P17031 533 aaPredicted RBP3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 NR4A1P22736 598 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 FKBP2P26885 142 aaKnown RBP3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 THBS2P35442 1172 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 CRATP43155 626 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 PPOXP50336 477 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 IDH3GP51553 393 aaPredicted RBP3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 POLR2JP52435 117 aaKnown RBP3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 MAP2K6P52564 334 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 CDH12P55289 794 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 ERVS71-1P61550 626 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 LMO4P61968 165 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 DBPQ10586 325 aaPredicted RBP3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 GGTLC2Q14390 218 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 MAD2L1BPQ15013 274 aaPredicted RBP3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 RAB35Q15286 201 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 HIST3H3Q16695 136 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 CR1LQ2VPA4 569 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 C3orf36Q3SXR2 165 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 LIN52Q52LA3 116 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 RUNDC3AQ59EK9 446 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 PRAMEF8Q5VWM4 474 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 PRAMEF7Q5VXH5 474 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 ATG16L1Q676U5 607 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 CGB2Q6NT52 195 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 KLHL24Q6TFL4 600 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 MSANTD1Q6ZTZ1 278 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 SLC46A3Q7Z3Q1 461 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 GPAT4Q86UL3 456 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 SKA3Q8IX90 412 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 PEX5LQ8IYB4 626 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 FBXL14Q8N1E6 418 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF786Q8N393 782 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 POMGNT2Q8NAT1 580 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 GLB1L3Q8NCI6 653 aaPredicted RBP3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 SEMA6DQ8NFY4 1073 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 OR6T1Q8NGN1 323 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 SLC38A4Q969I6 547 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 SLC35B4Q969S0 331 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 TAMM41Q96BW9 452 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 SLC25A36Q96CQ1 311 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 DDIT4LQ96D03 193 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 ADAD1Q96M93 576 aaKnown RBP3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 OXGR1Q96P68 337 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 SEPHS2Q99611 448 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 ARHGDIGQ99819 225 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 RHNO1Q9BSD3 238 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 NAA11Q9BSU3 229 aaPredicted RBP3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF442Q9H7R0 627 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 CRLF2Q9HC73 371 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 KCNK9Q9NPC2 374 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 TMEM45AQ9NWC5 275 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 DCAF16Q9NXF7 216 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 P2RX2Q9UBL9 471 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 RCE1Q9Y256 329 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 RASD1Q9Y272 281 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 UGT2A1Q9Y4X1 527 aa3.82□□□□□ -1.8
PPP4R1-209ENST00000578329 SPIN1Q9Y657 262 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms