RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 SNX33Q8WV41 574 aa11.97□□□□□ -0.49
PPP4R1-206ENST00000577779 OIT3Q8WWZ8 545 aa11.97□□□□□ -0.49
PPP4R1-206ENST00000577779 TRIM44Q96DX7 344 aaPredicted RBP11.97□□□□□ -0.49
PPP4R1-206ENST00000577779 ZNF837Q96EG3 531 aaPredicted RBP11.97□□□□□ -0.49
PPP4R1-206ENST00000577779 MRI1Q9BV20 369 aa11.97□□□□□ -0.49
PPP4R1-206ENST00000577779 TNFRSF12AQ9NP84 129 aa11.97□□□□□ -0.49
PPP4R1-206ENST00000577779 DECR2Q9NUI1 292 aa11.97□□□□□ -0.49
PPP4R1-206ENST00000577779 RASD1Q9Y272 281 aa11.97□□□□□ -0.49
PPP4R1-206ENST00000577779 CACNG2Q9Y698 323 aa11.97□□□□□ -0.49
PPP4R1-206ENST00000577779 DNAH3Q8TD57 4116 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 CLDN24A6NM45 220 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 H3BQF6 201 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 CFLARO15519 480 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 HOXA3O43365 443 aaPredicted RBP11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 TRAF3IP2O43734 574 aaPredicted RBP11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 SLC43A1O75387 559 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 NGFP01138 241 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 UROSP10746 265 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 SELEP16581 610 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 CXCR1P25024 350 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 LSP1P33241 339 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 CLDN17P56750 224 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 SELENOVP59797 346 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 ETF1P62495 437 aaKnown RBP11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 KCNJ10P78508 379 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 PLAURQ03405 335 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 PIGFQ07326 219 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 HLXQ14774 488 aaPredicted RBP11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 LIPMQ5VYY2 423 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 AP1ARQ63HQ0 302 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 TYW3Q6IPR3 259 aaKnown RBP11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 JAZF1Q86VZ6 243 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 CMIPQ8IY22 773 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 OR2T11Q8NH01 316 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 CNOT9Q92600 299 aaKnown RBP11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 EXD2Q9NVH0 621 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 NKIRAS2Q9NYR9 191 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 NINJ2Q9NZG7 142 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 TMED5Q9Y3A6 229 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 WDR45Q9Y484 360 aa11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 SOX21Q9Y651 276 aaPredicted RBP11.96□□□□□ -0.49
PPP4R1-206ENST00000577779 IGHV3OR16-10A0A075B7F0 116 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 ZNF99A8MXY4 864 aaPredicted RBP11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 G3V4G9 280 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 NDUFA7O95182 113 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 CLPTM1O96005 669 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 RPL3P39023 403 aaKnown RBP11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 PTDSS1P48651 473 aaKnown RBP11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 KLF3P57682 345 aaPredicted RBP11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 RELBQ01201 579 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 GALNTL6Q49A17 601 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 VAX1Q5SQQ9 334 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 CLEC6AQ6EIG7 209 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 RGS7BPQ6MZT1 257 aaPredicted RBP11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 REC114Q7Z4M0 266 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 C6orf120Q7Z4R8 191 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 ZG16BQ96DA0 208 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 KTI12Q96EK9 354 aaPredicted RBP11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 SAP30LQ9HAJ7 183 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 TNFRSF19Q9NS68 423 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 ATAD3AQ9NVI7 634 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 C1RLQ9NZP8 487 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 SEC14L4Q9UDX3 406 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 RCE1Q9Y256 329 aa11.95□□□□□ -0.5
PPP4R1-206ENST00000577779 NOTCH3Q9UM47 2321 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 MDFIC2A0A1B0GVS7 189 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 AGAP5A6NIR3 686 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 POC1B-GALNT4F8VUJ3 575 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 TRAPPC2LH3BP13 241 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 IGHMP01871 453 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 IGHV4-38-2P0DP08 117 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 NEFHP12036 1026 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 UQCRBP14927 111 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 ZNF12P17014 697 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 ATAD3BQ5T9A4 648 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 FIP1L1Q6UN15 594 aaKnown RBP11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 FRMD7Q6ZUT3 714 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 C9orf139Q6ZV77 190 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 KDM8Q8N371 416 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 PARP8Q8N3A8 854 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 NOA1Q8NC60 698 aaKnown RBP11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 OR52E2Q8NGJ4 325 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 CCL17Q92583 94 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 SLC35G5Q96KT7 338 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 ZNF75AQ96N20 296 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 TSPAN32Q96QS1 320 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 RAB17Q9H0T7 212 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 TCF7L1Q9HCS4 588 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 POLE3Q9NRF9 147 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 SLCO1C1Q9NYB5 712 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 SLC7A8Q9UHI5 535 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 INSIG2Q9Y5U4 225 aa11.94□□□□□ -0.5
PPP4R1-206ENST00000577779 SLC22A23A1A5C7 686 aa11.93□□□□□ -0.5
PPP4R1-206ENST00000577779 ZSCAN12O43309 604 aa11.93□□□□□ -0.5
PPP4R1-206ENST00000577779 FRS3O43559 492 aa11.93□□□□□ -0.5
PPP4R1-206ENST00000577779 RAB36O95755 333 aa11.93□□□□□ -0.5
PPP4R1-206ENST00000577779 SNRPAP09012 282 aaKnown RBP11.93□□□□□ -0.5
PPP4R1-206ENST00000577779 ZNF43P17038 809 aa11.93□□□□□ -0.5
PPP4R1-206ENST00000577779 GIPRP48546 466 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms