RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 GSNP06396 782 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 MYZAPP0CAP1 466 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 GAAP10253 952 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 ANPEPP15144 967 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 RPS5P46782 204 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 TMEM33P57088 247 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 RPS23P62266 143 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 MRPS11P82912 194 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 GALK2Q01415 458 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 LARS2Q15031 903 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 GSG1Q2KHT4 349 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 TRMT5Q32P41 509 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 ATG16L1Q676U5 607 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 THSD4Q6ZMP0 1018 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZNF621Q6ZSS3 439 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 VRK2Q86Y07 508 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 KDM8Q8N371 416 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 KIF18AQ8NI77 898 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 PNPT1Q8TCS8 783 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 MGARPQ8TDB4 240 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 OXGR1Q96P68 337 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZNF416Q9BWM5 594 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 RACGAP1Q9H0H5 632 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 TREM2Q9NZC2 230 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZNF232Q9UNY5 417 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZNF443Q9Y2A4 671 aaPredicted RBP10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 DSPPQ9NZW4 1301 aa10.02□□□□□ -0.81
CTDNEP1-212ENST00000576613 AIM2O14862 343 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 PPIHO43447 177 aaKnown RBP10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 KCNAB3O43448 404 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 SEC14L2O76054 403 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 KRT75O95678 551 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 C1QCP02747 245 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 HPXP02790 462 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 CD79AP11912 226 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 LBPP18428 481 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 TCN1P20061 433 aaPredicted RBP10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 GLRXP35754 106 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 ARFIP2P53365 341 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 CRISP3P54108 245 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 MYBPC1Q00872 1141 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZNF311Q5JNZ3 666 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 COX20Q5RI15 118 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 GKAP1Q5VSY0 366 aaPredicted RBP10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 NUDCD3Q8IVD9 361 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 KIRREL3Q8IZU9 778 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZNF781Q8N8C0 355 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZNF837Q96EG3 531 aaPredicted RBP10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 SYT3Q9BQG1 590 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 SUCNR1Q9BXA5 334 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZNF385DQ9H6B1 395 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZNF275Q9NSD4 429 aaPredicted RBP10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 LGALS13Q9UHV8 139 aa10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZNF346Q9UL40 294 aaKnown RBP10.01□□□□□ -0.81
CTDNEP1-212ENST00000576613 A0A1W2PPW3 197 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 TMEM247A6NEH6 219 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 M0R3G1 203 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 OR2T1O43869 369 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 HLA-HP01893 362 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 BCHEP06276 602 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 PRG2P13727 222 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 COL8A2P25067 703 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 LSP1P33241 339 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 CDKN2CP42773 168 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 ALDH3B1P43353 468 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 IFFO1Q0D2I5 559 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 ACSM5Q6NUN0 579 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 C5orf46Q6UWT4 87 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 SERPINA11Q86U17 422 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 CARM1Q86X55 608 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 SNX32Q86XE0 403 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 TMEM123Q8N131 208 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10□□□□□ -0.813e-10■■■■■ 88.3
CTDNEP1-212ENST00000576613 MS4A3Q96HJ5 214 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 OR2M2Q96R28 347 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 OR52E6Q96RD3 313 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZBTB18Q99592 522 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 PTDSS2Q9BVG9 487 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 SPATA9Q9BWV2 254 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 DENND2DQ9H6A0 471 aaPredicted RBP10□□□□□ -0.81
CTDNEP1-212ENST00000576613 B3GAT2Q9NPZ5 323 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 SLC52A3Q9NQ40 469 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 B3GNT2Q9NY97 397 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 B3GAT1Q9P2W7 334 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 SEC14L4Q9UDX3 406 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 FBXL3Q9UKT7 428 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 RAP2CQ9Y3L5 183 aa10□□□□□ -0.81
CTDNEP1-212ENST00000576613 LOC105371242A0A075B767 164 aa9.99□□□□□ -0.81
CTDNEP1-212ENST00000576613 A0A0G2JMP0 313 aa9.99□□□□□ -0.81
CTDNEP1-212ENST00000576613 A0A0X1KG70 313 aa9.99□□□□□ -0.81
CTDNEP1-212ENST00000576613 LOC102725191A0A1B0GVB3 256 aa9.99□□□□□ -0.81
CTDNEP1-212ENST00000576613 M0R082 166 aa9.99□□□□□ -0.81
CTDNEP1-212ENST00000576613 RFXANKO14593 260 aa9.99□□□□□ -0.81
CTDNEP1-212ENST00000576613 WNT9BO14905 357 aa9.99□□□□□ -0.81
CTDNEP1-212ENST00000576613 ITM2AO43736 263 aa9.99□□□□□ -0.81
CTDNEP1-212ENST00000576613 FZD7O75084 574 aa9.99□□□□□ -0.81
CTDNEP1-212ENST00000576613 RAB36O95755 333 aa9.99□□□□□ -0.81
CTDNEP1-212ENST00000576613 BCL10O95999 233 aa9.99□□□□□ -0.81
CTDNEP1-212ENST00000576613 SERPINE1P05121 402 aa9.99□□□□□ -0.81
CTDNEP1-212ENST00000576613 ZNF35P13682 527 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms