RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ZNF43P17038 809 aa13.87□□□□□ -0.19
CTDNEP1-211ENST00000575783 PRPS1L1P21108 318 aa13.87□□□□□ -0.19
CTDNEP1-211ENST00000575783 RPS23P62266 143 aaKnown RBP13.87□□□□□ -0.19
CTDNEP1-211ENST00000575783 GSG1Q2KHT4 349 aa13.87□□□□□ -0.19
CTDNEP1-211ENST00000575783 ARMCX4Q5H9R4 360 aa13.87□□□□□ -0.19
CTDNEP1-211ENST00000575783 TMEM154Q6P9G4 183 aa13.87□□□□□ -0.19
CTDNEP1-211ENST00000575783 CADM2Q8N3J6 435 aa13.87□□□□□ -0.19
CTDNEP1-211ENST00000575783 OR4A15Q8NGL6 344 aa13.87□□□□□ -0.19
CTDNEP1-211ENST00000575783 MIPOL1Q8TD10 442 aa13.87□□□□□ -0.19
CTDNEP1-211ENST00000575783 SLC25A36Q96CQ1 311 aa13.87□□□□□ -0.19
CTDNEP1-211ENST00000575783 FMO2Q99518 471 aa13.87□□□□□ -0.19
CTDNEP1-211ENST00000575783 TAAR3PQ9P1P4 343 aa13.87□□□□□ -0.19
CTDNEP1-211ENST00000575783 TBK1Q9UHD2 729 aa13.87□□□□□ -0.19
CTDNEP1-211ENST00000575783 WIPI2Q9Y4P8 454 aa13.87□□□□□ -0.19
CTDNEP1-211ENST00000575783 IGHV1-69-2A0A0G2JMI3 117 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 A0A1W2PPM1 405 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 A8MVM7 634 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 ZNF99A8MXY4 864 aaPredicted RBP13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 M0R3G1 203 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 TPD52L2O43399 206 aaKnown RBP13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 GLRA3O75311 464 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 ZNF14P17017 642 aaPredicted RBP13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 CRYBB2P43320 205 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 PTDSS1P48651 473 aaKnown RBP13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 EPS8Q12929 822 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 SLC9A3R2Q15599 337 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 FXNQ16595 210 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 GSTA3Q16772 222 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 C1orf140Q5VVS0 124 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 OR4F3Q6IEY1 312 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 C1QL4Q86Z23 238 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 RIMKLAQ8IXN7 391 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 CMIPQ8IY22 773 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 FNDC5Q8NAU1 212 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 TMIGD2Q96BF3 282 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 ZNF48Q96MX3 618 aaPredicted RBP13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 GAL3ST1Q99999 423 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 HINT3Q9NQE9 182 aaKnown RBP13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 RCE1Q9Y256 329 aa13.86□□□□□ -0.19
CTDNEP1-211ENST00000575783 RYR3Q15413 4870 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 PRAMEF27A3QJZ7 478 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 C17orf100A8MU93 164 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 CLDN25C9JDP6 229 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 FAAHO00519 579 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 FRS3O43559 492 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 PLIN3O60664 434 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 CLPTM1O96005 669 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 TFPTP0C1Z6 253 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 GKN3PP0CG01 181 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 IL7RP16871 459 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 AQP5P55064 265 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 TEKQ02763 1124 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 C1DQ13901 141 aaKnown RBP13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 UGT3A2Q3SY77 523 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 CCDC153Q494R4 210 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 SAXO2Q658L1 398 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 C17orf107Q6ZR85 190 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 SPATC1Q76KD6 591 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 AGR3Q8TD06 166 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 RAB1CQ92928 201 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 TIMD4Q96H15 378 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 DPY30Q9C005 99 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 MMP27Q9H306 513 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 RLIMQ9NVW2 624 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 PLEK2Q9NYT0 353 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 UBAP1Q9NZ09 502 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 GPR160Q9UJ42 338 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 MID2Q9UJV3 735 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 CACNG2Q9Y698 323 aa13.85□□□□□ -0.19
CTDNEP1-211ENST00000575783 AGAP5A6NIR3 686 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 CPSF4O95639 269 aaKnown RBP13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 KNG1P01042 644 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 PNMTP11086 282 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 CASQ1P31415 396 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 LSP1P33241 339 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 GIPRP48546 466 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 ATP4BP51164 291 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 SELENOVP59797 346 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 RAB1AP62820 205 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 GNA13Q14344 377 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 SYPL1Q16563 259 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 TUSC1Q2TAM9 212 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 HFEQ30201 348 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 PCGF3Q3KNV8 242 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 FBLN7Q53RD9 439 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 C6orf136Q5SQH8 315 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 PHYHD1Q5SRE7 291 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 MRPL2Q5T653 305 aaKnown RBP13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 CARD17Q5XLA6 110 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 USP51Q70EK9 711 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 C10orf107Q8IVU9 208 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 ANKFN1Q8N957 763 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 GLB1L3Q8NCI6 653 aaPredicted RBP13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 PIK3C3Q8NEB9 887 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 POP5Q969H6 163 aaKnown RBP13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 ZNF75AQ96N20 296 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 TSPAN32Q96QS1 320 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 GATA5Q9BWX5 397 aaPredicted RBP13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 DECR2Q9NUI1 292 aa13.84□□□□□ -0.19
CTDNEP1-211ENST00000575783 SEC14L4Q9UDX3 406 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms