RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 C16orf89Q6UX73 402 aa18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 FAM156AQ8NDB6 213 aa18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 OR52N5Q8NH56 324 aa18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 UBTD1Q9HAC8 227 aa18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 RPS6KA6Q9UK32 745 aa18.22■□□□□ 0.51
HCFC1R1-208ENST00000575214 AKAP6Q13023 2319 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 ANKRD17O75179 2603 aaKnown RBP18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 ZNF587BE7ETH6 402 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 C11orf98E9PRG8 122 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 PLPP3O14495 311 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 SLC43A1O75387 559 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 SERPINI2O75830 405 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 OR6A2O95222 327 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 RAF1P04049 648 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 ADORA3P0DMS8 318 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 THRBP10828 461 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 HLA-DOBP13765 273 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 CDH2P19022 906 aaPredicted RBP18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 IST1P53990 364 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 UGT2B15P54855 530 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 ST3GAL3Q11203 375 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 KEAP1Q14145 624 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 GABRA6Q16445 453 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 SAMD4BQ5PRF9 694 aaKnown RBP18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 SSX8Q7RTT4 187 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 DEFB107AQ8IZN7 70 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 PFN4Q8NHR9 129 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 TMEM239Q8WW34 195 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 CDRT15Q96T59 188 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 MEPEQ9NQ76 525 aaPredicted RBP18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 CCM2LQ9NUG4 571 aaPredicted RBP18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 ZNF229Q9UJW7 825 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 A4GNTQ9UNA3 340 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 NOX1Q9Y5S8 564 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 SNX13Q9Y5W8 968 aa18.21■□□□□ 0.51
HCFC1R1-208ENST00000575214 A0A1W2PR80 420 aa18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 UPK3AO75631 287 aa18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 ZNF432O94892 652 aa18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 MT-ND1P03886 318 aa18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 HIST1H2ABP04908 130 aa18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 HOXC12P31275 282 aa18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 ZNF704Q6ZNC4 412 aaPredicted RBP18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 HIST3H2AQ7L7L0 130 aa18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 LRRC17Q8N6Y2 441 aa18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 RBM15BQ8NDT2 890 aaKnown RBP18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 C1orf162Q8NEQ5 155 aaPredicted RBP18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 HIST1H2ACQ93077 130 aa18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 HS6ST2Q96MM7 605 aa18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 MUS81Q96NY9 551 aa18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 FNDC11Q9BVV2 318 aa18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 LINC00470Q9BZP3 86 aa18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 ESRP2Q9H6T0 727 aaKnown RBP18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 MED31Q9Y3C7 131 aa18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 HRNRQ86YZ3 2850 aaPredicted RBP18.2■□□□□ 0.5
HCFC1R1-208ENST00000575214 J3KTA2 159 aa18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 PLAUP00749 431 aa18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 HSD17B1P14061 328 aa18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 HMBOX1Q6NT76 420 aa18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 SEZ6L2Q6UXD5 910 aa18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 SLC46A3Q7Z3Q1 461 aa18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 PXKQ7Z7A4 578 aa18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 GPR137CQ8N3F9 429 aa18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 PIK3C3Q8NEB9 887 aa18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 SGTBQ96EQ0 304 aa18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 NSL1Q96IY1 281 aa18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 OR2M2Q96R28 347 aa18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 EMC6Q9BV81 110 aa18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 MED29Q9NX70 200 aa18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 RHCGQ9UBD6 479 aa18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 SAMD4AQ9UPU9 718 aaKnown RBP18.19■□□□□ 0.5
HCFC1R1-208ENST00000575214 CLOCKO15516 846 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 RNF13O43567 381 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 ATE1O95260 518 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 CD3EP07766 207 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 ASAH2BP0C7U1 165 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 ART1P52961 327 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 ROR2Q01974 943 aaKnown RBP18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 NCMAPQ5T1S8 102 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 CARD17Q5XLA6 110 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 LINGO2Q7L985 606 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 NANOGNBQ7Z5D8 188 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 OFCC1Q8IZS5 231 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 C17orf78Q8N4C9 275 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 SLC17A5Q9NRA2 495 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 DCAF13Q9NV06 445 aaKnown RBP18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 NPAP1Q9NZP6 1156 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 CD300AQ9UGN4 299 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 MAGEL2Q9UJ55 1249 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 RNF115Q9Y4L5 304 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 SLC25A15Q9Y619 301 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 PRR14LQ5THK1 2151 aa18.18■□□□□ 0.5
HCFC1R1-208ENST00000575214 SLC35F4A4IF30 521 aa18.17■□□□□ 0.5
HCFC1R1-208ENST00000575214 B2RBV5 119 aa18.17■□□□□ 0.5
HCFC1R1-208ENST00000575214 OR7A10O76100 309 aa18.17■□□□□ 0.5
HCFC1R1-208ENST00000575214 MSX2P35548 267 aaPredicted RBP18.17■□□□□ 0.5
HCFC1R1-208ENST00000575214 BSPH1Q075Z2 132 aa18.17■□□□□ 0.5
HCFC1R1-208ENST00000575214 TRAM2Q15035 370 aa18.17■□□□□ 0.5
HCFC1R1-208ENST00000575214 ACKR1Q16570 336 aa18.17■□□□□ 0.5
HCFC1R1-208ENST00000575214 KLHL24Q6TFL4 600 aa18.17■□□□□ 0.5
HCFC1R1-208ENST00000575214 CYP4Z1Q86W10 505 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms