RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 RAD21L1Q9H4I0 556 aa13.2□□□□□ -0.3
CTNS-209ENST00000574776 CRLF2Q9HC73 371 aa13.2□□□□□ -0.3
CTNS-209ENST00000574776 SLAMF8Q9P0V8 285 aa13.2□□□□□ -0.3
CTNS-209ENST00000574776 KCNS2Q9ULS6 477 aa13.2□□□□□ -0.3
CTNS-209ENST00000574776 RCE1Q9Y256 329 aa13.2□□□□□ -0.3
CTNS-209ENST00000574776 A0A1B0GWA3 101 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 SH3PXD2BA1X283 911 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 ZNF503-AS2A6NEH8 195 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 VSTM5A8MXK1 200 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 AIM2O14862 343 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 OR2T1O43869 369 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 TPST1O60507 370 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 PDE5AO76074 875 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 ETS2P15036 469 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 HOXB9P17482 250 aaPredicted RBP13.19□□□□□ -0.3
CTNS-209ENST00000574776 HTR2AP28223 471 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 GRPRP30550 384 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 IDH3GP51553 393 aaPredicted RBP13.19□□□□□ -0.3
CTNS-209ENST00000574776 FADDQ13158 208 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 CEACAM16Q2WEN9 425 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 FAM120AOSQ5T036 256 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 FAM69AQ5T7M9 428 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 C6orf89Q6UWU4 347 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 COMTD1Q86VU5 262 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 ZCCHC24Q8N2G6 241 aaKnown RBP13.19□□□□□ -0.3
CTNS-209ENST00000574776 GOLGA6L1Q8N7Z2 621 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 LSMEM1Q8N8F7 131 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 NUP37Q8NFH4 326 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 SLC38A4Q969I6 547 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 DOK1Q99704 481 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 RAB1BQ9H0U4 201 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 C12orf10Q9HB07 376 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 MOV10Q9HCE1 1003 aaKnown RBP13.19□□□□□ -0.3
CTNS-209ENST00000574776 MYOZ1Q9NP98 299 aaPredicted RBP13.19□□□□□ -0.3
CTNS-209ENST00000574776 SLC25A37Q9NYZ2 338 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 USH1CQ9Y6N9 552 aa13.19□□□□□ -0.3
CTNS-209ENST00000574776 IGKV1D-42A0A075B6H8 117 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 TRAV36DV7A0A075B6V5 113 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 TMEM129A0AVI4 362 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 MS4A18H0YCH9 400 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 hCG_2039718K7EN88 272 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 M0R3G1 203 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 SEC14L2O76054 403 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 STAMBPO95630 424 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 TGFAP01135 160 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 SRD5A1P18405 259 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 NPR2P20594 1047 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 PRKAR1BP31321 381 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 ARR3P36575 388 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 CAPZA2P47755 286 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 PPOXP50336 477 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 SRSF2Q01130 221 aaKnown RBP13.18□□□□□ -0.3
CTNS-209ENST00000574776 NPRL3Q12980 569 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 MS4A18Q3C1V0 323 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 KRTAP24-1Q3LI83 254 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 GLIPR1L2Q4G1C9 344 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 ALG10BQ5I7T1 473 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 PHYHD1Q5SRE7 291 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 CARD17Q5XLA6 110 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 SPATA21Q7Z572 469 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 NET1Q7Z628 596 aaPredicted RBP13.18□□□□□ -0.3
CTNS-209ENST00000574776 FUNDC1Q8IVP5 155 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 MSRB3Q8IXL7 192 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 C10orf111Q8N326 155 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 SVOPLQ8N434 492 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 ZNF540Q8NDQ6 660 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 PIK3C3Q8NEB9 887 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 RNF217Q8TC41 542 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 TLCD1Q96CP7 247 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 OR2M2Q96R28 347 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 BPESC1Q9GZL8 116 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 ZNF442Q9H7R0 627 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 TMBIM4Q9HC24 238 aa13.18□□□□□ -0.3
CTNS-209ENST00000574776 IGHV2OR16-5A0A0B4J2B6 119 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 LOC102725191A0A1B0GVB3 256 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 LRP5LA4QPB2 252 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 FZD7O75084 574 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 HPRP00739 348 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 ARAFP10398 606 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 HLA-DOBP13765 273 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 DAOP14920 347 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 ZNF23P17027 643 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 STX1BP61266 288 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 CDK6Q00534 326 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 PAGE3Q5JUK9 113 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 LRIF1Q5T3J3 769 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 GCNT6Q5T4J0 391 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 REEP3Q6NUK4 255 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 ULK3Q6PHR2 472 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 DHRS4L2Q6PKH6 230 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 BLOC1S3Q6QNY0 202 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 C5orf46Q6UWT4 87 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 MDP1Q86V88 176 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 TMEM123Q8N131 208 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 DNAJA4Q8WW22 397 aaPredicted RBP13.17□□□□□ -0.3
CTNS-209ENST00000574776 TXNDC15Q96J42 360 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 SOX7Q9BT81 388 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 EMC6Q9BV81 110 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 KLHL14Q9P2G3 628 aa13.17□□□□□ -0.3
CTNS-209ENST00000574776 ZNF99A8MXY4 864 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms