RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 FOXK2Q01167 660 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 CD47Q08722 323 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 SNAPC1Q16533 368 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 DEPDC4Q8N2C3 294 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 TEX19Q8NA77 164 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 ADPRHL1Q8NDY3 354 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 SLC38A2Q96QD8 506 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 TEX12Q9BXU0 123 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 PLSCR2Q9NRY7 297 aa21.51■■□□□ 1.03
ATPAF1-213ENST00000574428 A0A1B0GVC2 190 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 SURF4O15260 269 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 EIF1BO60739 113 aaKnown RBP21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 CLPTM1O96005 669 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 ATP6V1B1P15313 513 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 ENPP1P22413 925 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 NOS3P29474 1203 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 PCYT1AP49585 367 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 ZP4Q12836 540 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 KCTD21Q4G0X4 260 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 PDSS1Q5T2R2 415 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 PTCHD4Q6ZW05 846 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 GPAT4Q86UL3 456 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 CISD2Q8N5K1 135 aaKnown RBP21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 TCEANCQ8N8B7 351 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 TSPAN14Q8NG11 270 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 CNIH3Q8TBE1 160 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 RASD2Q96D21 266 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 ZHX1-C8orf76Q96EF9 292 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 WDYHV1Q96HA8 205 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 SLC25A18Q9H1K4 315 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 B3GAT1Q9P2W7 334 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 BAIAP2Q9UQB8 552 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 CAMK2AQ9UQM7 478 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 GPR52Q9Y2T5 361 aa21.5■■□□□ 1.03
ATPAF1-213ENST00000574428 A0A1W2PNV4 684 aa21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 AQP7O14520 342 aa21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 SMAD9O15198 467 aaKnown RBP21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 DNPH1O43598 174 aa21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 MAP1BP46821 2468 aaKnown RBP21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 MAD2L1BPQ15013 274 aaPredicted RBP21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 FOXB2Q5VYV0 432 aa21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 FAM122BQ7Z309 247 aa21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 CNTNAP3BQ96NU0 1288 aa21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 TSPAN32Q96QS1 320 aa21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 NAA11Q9BSU3 229 aaPredicted RBP21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 CNTNAP3Q9BZ76 1288 aa21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 PRRG3Q9BZD7 231 aa21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 TIGARQ9NQ88 270 aa21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 KLHL13Q9P2N7 655 aa21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 BSNQ9UPA5 3926 aa21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 DNAJC13O75165 2243 aa21.49■■□□□ 1.03
ATPAF1-213ENST00000574428 A0A1B0GTH9 108 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 HMGN1P05114 100 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 TFAP2AP05549 437 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 CPN1P15169 458 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 AGFG1P52594 562 aaKnown RBP21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 POU3F1Q03052 451 aaPredicted RBP21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 ZNF239Q16600 458 aaKnown RBP21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 TMEM225Q6GV28 225 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 ARHGAP11AQ6P4F7 1023 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 LSM14AQ8ND56 463 aaKnown RBP21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 ROBO4Q8WZ75 1007 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 PLEKHA8Q96JA3 519 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 Q96M85 177 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 HSPE1-MOB4S4R3N1 261 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 TPRP12270 2363 aaKnown RBP21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 KIAA1549Q9HCM3 1950 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 TEX13CA0A0J9YWL9 993 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 TLX2O43763 284 aaPredicted RBP21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 HIST1H1CP16403 213 aaKnown RBP21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 RPS3AP61247 264 aaKnown RBP21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 ACKR1Q16570 336 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 PLXDC2Q6UX71 529 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 ANKK1Q8NFD2 765 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 RHOXF1Q8NHV9 184 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 APH1BQ8WW43 257 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 CPNE4Q96A23 557 aaPredicted RBP21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 GRHPRQ9UBQ7 328 aa21.48■■□□□ 1.03
ATPAF1-213ENST00000574428 NPIPA2E9PIF3 369 aa21.47■■□□□ 1.03
ATPAF1-213ENST00000574428 NPIPA3F8WFD2 350 aa21.47■■□□□ 1.03
ATPAF1-213ENST00000574428 ARPC3O15145 178 aa21.47■■□□□ 1.03
ATPAF1-213ENST00000574428 GABRB1P18505 474 aa21.47■■□□□ 1.03
ATPAF1-213ENST00000574428 LY6DQ14210 128 aa21.47■■□□□ 1.03
ATPAF1-213ENST00000574428 PRR30Q53SZ7 412 aaPredicted RBP21.47■■□□□ 1.03
ATPAF1-213ENST00000574428 PXKQ7Z7A4 578 aa21.47■■□□□ 1.03
ATPAF1-213ENST00000574428 OR4K13Q8NH42 304 aa21.47■■□□□ 1.03
ATPAF1-213ENST00000574428 FBLIM1Q8WUP2 373 aa21.47■■□□□ 1.03
ATPAF1-213ENST00000574428 GPR137Q96N19 417 aa21.47■■□□□ 1.03
ATPAF1-213ENST00000574428 FANCFQ9NPI8 374 aa21.47■■□□□ 1.03
ATPAF1-213ENST00000574428 CMC2Q9NRP2 79 aa21.47■■□□□ 1.03
ATPAF1-213ENST00000574428 ZNF346Q9UL40 294 aaKnown RBP21.47■■□□□ 1.03
ATPAF1-213ENST00000574428 TLN1Q9Y490 2541 aaKnown RBP21.47■■□□□ 1.03
ATPAF1-213ENST00000574428 A0A1W2PRG6 482 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 TRIM64A6NGJ6 449 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 IFNGR1P15260 489 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 SDHAP31040 664 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 CDH15P55291 814 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 EFNB1P98172 346 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 CDK5R2Q13319 367 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 MELKQ14680 651 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms