RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 OR2M2Q96R28 347 aa24.36■■□□□ 1.49
SCARF1-207ENST00000573867 SLC19A3Q9BZV2 496 aa24.36■■□□□ 1.49
SCARF1-207ENST00000573867 POLR2J2Q9GZM3 115 aaKnown RBP24.36■■□□□ 1.49
SCARF1-207ENST00000573867 POLR2J3Q9H1A7 115 aaKnown RBP24.36■■□□□ 1.49
SCARF1-207ENST00000573867 CXXC4Q9H2H0 198 aa24.36■■□□□ 1.49
SCARF1-207ENST00000573867 EGFL7Q9UHF1 273 aa24.36■■□□□ 1.49
SCARF1-207ENST00000573867 NDUFAB1O14561 156 aa24.35■■□□□ 1.49
SCARF1-207ENST00000573867 ZNF682O95780 498 aa24.35■■□□□ 1.49
SCARF1-207ENST00000573867 BSPH1Q075Z2 132 aa24.35■■□□□ 1.49
SCARF1-207ENST00000573867 PUDPQ08623 228 aa24.35■■□□□ 1.49
SCARF1-207ENST00000573867 FOXD4Q12950 439 aaPredicted RBP24.35■■□□□ 1.49
SCARF1-207ENST00000573867 UEVLDQ8IX04 471 aa24.35■■□□□ 1.49
SCARF1-207ENST00000573867 TMEM123Q8N131 208 aa24.35■■□□□ 1.49
SCARF1-207ENST00000573867 FITM2Q8N6M3 262 aa24.35■■□□□ 1.49
SCARF1-207ENST00000573867 FAM156AQ8NDB6 213 aa24.35■■□□□ 1.49
SCARF1-207ENST00000573867 C1orf162Q8NEQ5 155 aaPredicted RBP24.35■■□□□ 1.49
SCARF1-207ENST00000573867 MUCL1Q96DR8 90 aa24.35■■□□□ 1.49
SCARF1-207ENST00000573867 TXNDC15Q96J42 360 aa24.35■■□□□ 1.49
SCARF1-207ENST00000573867 FOXC2Q99958 501 aa24.35■■□□□ 1.49
SCARF1-207ENST00000573867 LINC00470Q9BZP3 86 aa24.35■■□□□ 1.49
SCARF1-207ENST00000573867 ADA2Q9NZK5 511 aa24.35■■□□□ 1.49
SCARF1-207ENST00000573867 J3KTA2 159 aa24.34■■□□□ 1.49
SCARF1-207ENST00000573867 CDH2P19022 906 aaPredicted RBP24.34■■□□□ 1.49
SCARF1-207ENST00000573867 YAP1P46937 504 aaKnown RBP24.34■■□□□ 1.49
SCARF1-207ENST00000573867 LSM11P83369 360 aaKnown RBP eCLIP24.34■■□□□ 1.49
SCARF1-207ENST00000573867 POU3F1Q03052 451 aaPredicted RBP24.34■■□□□ 1.49
SCARF1-207ENST00000573867 OR7E24Q6IFN5 339 aa24.34■■□□□ 1.49
SCARF1-207ENST00000573867 TSEN54Q7Z6J9 526 aaKnown RBP24.34■■□□□ 1.49
SCARF1-207ENST00000573867 LZICQ8WZA0 190 aa24.34■■□□□ 1.49
SCARF1-207ENST00000573867 NEUROG1Q92886 237 aa24.34■■□□□ 1.49
SCARF1-207ENST00000573867 HSH2DQ96JZ2 352 aa24.34■■□□□ 1.49
SCARF1-207ENST00000573867 PRRC1Q96M27 445 aa24.34■■□□□ 1.49
SCARF1-207ENST00000573867 EMC6Q9BV81 110 aa24.34■■□□□ 1.49
SCARF1-207ENST00000573867 FKRPQ9H9S5 495 aa24.34■■□□□ 1.49
SCARF1-207ENST00000573867 SLC17A5Q9NRA2 495 aa24.34■■□□□ 1.49
SCARF1-207ENST00000573867 C20orf141Q9NUB4 165 aa24.34■■□□□ 1.49
SCARF1-207ENST00000573867 MED29Q9NX70 200 aa24.34■■□□□ 1.49
SCARF1-207ENST00000573867 HIVEP1P15822 2718 aa24.33■■□□□ 1.49
SCARF1-207ENST00000573867 FFAR1O14842 300 aa24.33■■□□□ 1.49
SCARF1-207ENST00000573867 FAM107AO95990 144 aa24.33■■□□□ 1.49
SCARF1-207ENST00000573867 ASAH2BP0C7U1 165 aa24.33■■□□□ 1.49
SCARF1-207ENST00000573867 DEFB113Q30KQ7 82 aa24.33■■□□□ 1.49
SCARF1-207ENST00000573867 HIKESHIQ53FT3 197 aa24.33■■□□□ 1.49
SCARF1-207ENST00000573867 PHYHD1Q5SRE7 291 aa24.33■■□□□ 1.49
SCARF1-207ENST00000573867 SPNS3Q6ZMD2 512 aa24.33■■□□□ 1.49
SCARF1-207ENST00000573867 PGAM4Q8N0Y7 254 aa24.33■■□□□ 1.49
SCARF1-207ENST00000573867 FAM162AQ96A26 154 aa24.33■■□□□ 1.49
SCARF1-207ENST00000573867 ESRP2Q9H6T0 727 aaKnown RBP24.33■■□□□ 1.49
SCARF1-207ENST00000573867 NGBQ9NPG2 151 aa24.33■■□□□ 1.49
SCARF1-207ENST00000573867 TAS2R5Q9NYW4 299 aa24.33■■□□□ 1.49
SCARF1-207ENST00000573867 RNF115Q9Y4L5 304 aa24.33■■□□□ 1.49
SCARF1-207ENST00000573867 VPS13CQ709C8 3753 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 ZNF587BE7ETH6 402 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 C11orf98E9PRG8 122 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 PIP5K1CO60331 668 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 KRT33AO76009 404 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 MT-ND1P03886 318 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 ADORA3P0DMS8 318 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 THRBP10828 461 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 RBM34P42696 430 aaKnown RBP24.32■■□□□ 1.48
SCARF1-207ENST00000573867 IFI44LQ53G44 452 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 KBTBD8Q8NFY9 601 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 TMEM239Q8WW34 195 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 GEMIN6Q8WXD5 167 aaKnown RBP24.32■■□□□ 1.48
SCARF1-207ENST00000573867 ZNF837Q96EG3 531 aaPredicted RBP24.32■■□□□ 1.48
SCARF1-207ENST00000573867 NELFAQ9H3P2 528 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 NANSQ9NR45 359 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 MAN2C1Q9NTJ4 1040 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 RHCGQ9UBD6 479 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 ZNF229Q9UJW7 825 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 EDARQ9UNE0 448 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 NOX1Q9Y5S8 564 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 ROS1P08922 2347 aa24.32■■□□□ 1.48
SCARF1-207ENST00000573867 OR6C65A6NJZ3 312 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 CLOCKO15516 846 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 SLC43A1O75387 559 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 SERPINI2O75830 405 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 PRSS23O95084 383 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 IFNW1P05000 195 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 CD3EP07766 207 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 AHCYP23526 432 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 ZNF83P51522 516 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 ROR2Q01974 943 aaKnown RBP24.31■■□□□ 1.48
SCARF1-207ENST00000573867 TGFBR3Q03167 851 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 FXNQ16595 210 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 CARD17Q5XLA6 110 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 GLYATQ6IB77 296 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 PXKQ7Z7A4 578 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 C17orf78Q8N4C9 275 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 FAM86B1Q8N7N1 296 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 OR1K1Q8NGR3 316 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 IGFBPL1Q8WX77 278 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 AKAP1Q92667 903 aaKnown RBP eCLIP24.31■■□□□ 1.48
SCARF1-207ENST00000573867 BOD1Q96IK1 185 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 C1QTNF6Q9BXI9 259 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 CD300AQ9UGN4 299 aa24.31■■□□□ 1.48
SCARF1-207ENST00000573867 MAP1AP78559 2803 aaPredicted RBP24.31■■□□□ 1.48
SCARF1-207ENST00000573867 SLC35F4A4IF30 521 aa24.3■■□□□ 1.48
SCARF1-207ENST00000573867 HS3ST1O14792 307 aa24.3■■□□□ 1.48
SCARF1-207ENST00000573867 TCN1P20061 433 aaPredicted RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms