RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 RENP00797 406 aa26.26■■□□□ 1.79
CTDNEP1-208ENST00000573600 MRPL3P09001 348 aaKnown RBP26.26■■□□□ 1.79
CTDNEP1-208ENST00000573600 TFPIP10646 304 aa26.26■■□□□ 1.79
CTDNEP1-208ENST00000573600 ZP4Q12836 540 aa26.26■■□□□ 1.79
CTDNEP1-208ENST00000573600 MESTQ5EB52 335 aa26.26■■□□□ 1.79
CTDNEP1-208ENST00000573600 OR1J4Q8NGS1 313 aa26.26■■□□□ 1.79
CTDNEP1-208ENST00000573600 ZPLD1Q8TCW7 415 aa26.26■■□□□ 1.79
CTDNEP1-208ENST00000573600 SLC25A43Q8WUT9 341 aaPredicted RBP26.26■■□□□ 1.79
CTDNEP1-208ENST00000573600 SPRYD4Q8WW59 207 aaPredicted RBP26.26■■□□□ 1.79
CTDNEP1-208ENST00000573600 NKD1Q969G9 470 aa26.26■■□□□ 1.79
CTDNEP1-208ENST00000573600 ZMYND19Q96E35 227 aaPredicted RBP26.26■■□□□ 1.79
CTDNEP1-208ENST00000573600 TMEM41AQ96HV5 264 aa26.26■■□□□ 1.79
CTDNEP1-208ENST00000573600 CLPXO76031 633 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 IGHMP01871 453 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 AHCYP23526 432 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 RBMS1P29558 406 aaKnown RBP26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 CAPZA2P47755 286 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 SERPINB10P48595 397 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 BDH1Q02338 343 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 DYNC1I2Q13409 638 aaKnown RBP26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 OR7A5Q15622 319 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 B3GNTL1Q67FW5 361 aaPredicted RBP26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 ADCK1Q86TW2 530 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 IL22RA1Q8N6P7 574 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 ZNF248Q8NDW4 579 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 THOC3Q96J01 351 aaKnown RBP26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 SNX18Q96RF0 628 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 TXNIPQ9H3M7 391 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 RPRD1BQ9NQG5 326 aaKnown RBP26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 NOX1Q9Y5S8 564 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 SHISA8B8ZZ34 492 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 EFNA2O43921 213 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 TRIM3O75382 744 aaPredicted RBP26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 P04436 131 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 CD79BP40259 229 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 DSCR4P56555 118 aaPredicted RBP26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 RPL27P61353 136 aaKnown RBP26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 SELENBP1Q13228 472 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 ZNF468Q5VIY5 522 aaPredicted RBP26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 ARIH2OSQ8N7S6 290 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 EXD3Q8N9H8 876 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 ATP6V1C2Q8NEY4 427 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 PSMF1Q92530 271 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 TBX5Q99593 518 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 CENPOQ9BU64 300 aa26.25■■□□□ 1.79
CTDNEP1-208ENST00000573600 DLL1O00548 723 aa26.24■■□□□ 1.79
CTDNEP1-208ENST00000573600 XKRYO14609 159 aa26.24■■□□□ 1.79
CTDNEP1-208ENST00000573600 FZD7O75084 574 aa26.24■■□□□ 1.79
CTDNEP1-208ENST00000573600 OR2T7P0C7T2 308 aa26.24■■□□□ 1.79
CTDNEP1-208ENST00000573600 LIFP15018 202 aa26.24■■□□□ 1.79
CTDNEP1-208ENST00000573600 H1FNTQ75WM6 255 aaPredicted RBP26.24■■□□□ 1.79
CTDNEP1-208ENST00000573600 GHDCQ8N2G8 530 aa26.24■■□□□ 1.79
CTDNEP1-208ENST00000573600 OR2T27Q8NH04 317 aa26.24■■□□□ 1.79
CTDNEP1-208ENST00000573600 TBC1D15Q8TC07 691 aa26.24■■□□□ 1.79
CTDNEP1-208ENST00000573600 SACM1LQ9NTJ5 587 aa26.24■■□□□ 1.79
CTDNEP1-208ENST00000573600 ALKBH4Q9NXW9 302 aa26.24■■□□□ 1.79
CTDNEP1-208ENST00000573600 TEKT2Q9UIF3 430 aa26.24■■□□□ 1.79
CTDNEP1-208ENST00000573600 LIPT2A6NK58 231 aa26.23■■□□□ 1.79
CTDNEP1-208ENST00000573600 H3BML4 177 aa26.23■■□□□ 1.79
CTDNEP1-208ENST00000573600 GPX5O75715 221 aa26.23■■□□□ 1.79
CTDNEP1-208ENST00000573600 IMPDH2P12268 514 aa26.23■■□□□ 1.79
CTDNEP1-208ENST00000573600 RPS3AP61247 264 aaKnown RBP26.23■■□□□ 1.79
CTDNEP1-208ENST00000573600 DBPQ10586 325 aaPredicted RBP26.23■■□□□ 1.79
CTDNEP1-208ENST00000573600 TIGD3Q6B0B8 471 aa26.23■■□□□ 1.79
CTDNEP1-208ENST00000573600 OR51L1Q8NGJ5 315 aa26.23■■□□□ 1.79
CTDNEP1-208ENST00000573600 OR2T4Q8NH00 348 aa26.23■■□□□ 1.79
CTDNEP1-208ENST00000573600 NXPE2Q96DL1 559 aa26.23■■□□□ 1.79
CTDNEP1-208ENST00000573600 SSR3Q9UNL2 185 aa26.23■■□□□ 1.79
CTDNEP1-208ENST00000573600 A0A1W2PRG6 482 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 IL11P20809 199 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 DPP4P27487 766 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 TGFBR1P36897 503 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 CRYBB2P43320 205 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 PUDPQ08623 228 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 ACKR1Q16570 336 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 GTPBP8Q8N3Z3 284 aaPredicted RBP26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 ALG12Q9BV10 488 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 CHST11Q9NPF2 352 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 IL17BQ9UHF5 180 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 CDRT15L2A8MXV6 281 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 CBR3O75828 277 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 ACVR1BP36896 505 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 CYB561P49447 251 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 DCAF10Q5QP82 559 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 LINC01590Q5TEZ4 76 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 LINC00299Q6ZSB3 139 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 MDGA2Q7Z553 956 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 OR6K6Q8NGW6 343 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 ZNF519Q8TB69 540 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 EXOSC4Q9NPD3 245 aaKnown RBP26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 BABAM2Q9NXR7 383 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 B3GALT5Q9Y2C3 310 aa26.22■■□□□ 1.79
CTDNEP1-208ENST00000573600 ARHGEF9O43307 516 aa26.21■■□□□ 1.79
CTDNEP1-208ENST00000573600 MT-ND5P03915 603 aa26.21■■□□□ 1.79
CTDNEP1-208ENST00000573600 ZNF85Q03923 595 aa26.21■■□□□ 1.79
CTDNEP1-208ENST00000573600 DTX1Q86Y01 620 aa26.21■■□□□ 1.79
CTDNEP1-208ENST00000573600 SLC35F2Q8IXU6 374 aa26.21■■□□□ 1.79
CTDNEP1-208ENST00000573600 BEST3Q8N1M1 668 aa26.21■■□□□ 1.79
CTDNEP1-208ENST00000573600 ZNRF4Q8WWF5 429 aa26.21■■□□□ 1.79
CTDNEP1-208ENST00000573600 KIAA1143Q96AT1 154 aaPredicted RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms