RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 ZNF587Q96SQ5 575 aaPredicted RBP15.13■□□□□ 0.01
SMG6-212ENST00000573153 EPYCQ99645 322 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 C1QTNF6Q9BXI9 259 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 SELENONQ9NZV5 590 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 MGAT4BQ9UQ53 548 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 CAPN7Q9Y6W3 813 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 CSPG4Q6UVK1 2322 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 A0A096LNT2 108 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 ZNF503-AS2A6NEH8 195 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 M0R3H8 397 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 CHP2O43745 196 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 OPN1SWP03999 348 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 GTF2E2P29084 291 aaKnown RBP15.12■□□□□ 0.01
SMG6-212ENST00000573153 GRPRP30550 384 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 TNK1Q13470 666 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 MMEL1Q495T6 779 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 ERICH5Q6P6B1 374 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 TMEM108Q6UXF1 575 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 CLEC9AQ6UXN8 241 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 SNX32Q86XE0 403 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 TMEM123Q8N131 208 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 PCYOX1LQ8NBM8 494 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 BCL2L2Q92843 193 aaPredicted RBP15.12■□□□□ 0.01
SMG6-212ENST00000573153 ZNF837Q96EG3 531 aaPredicted RBP15.12■□□□□ 0.01
SMG6-212ENST00000573153 ZNF583Q96ND8 569 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 MCHR1Q99705 422 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 OBP2BQ9NPH6 170 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 GID8Q9NWU2 228 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 GDF2Q9UK05 429 aaPredicted RBP15.12■□□□□ 0.01
SMG6-212ENST00000573153 AMDHD2Q9Y303 409 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 ALPK2Q86TB3 2170 aa15.12■□□□□ 0.01
SMG6-212ENST00000573153 TLN2Q9Y4G6 2542 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 LRRN3E7EW58 273 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 MS4A18H0YCH9 400 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 RPL36A-HNRNPH2H7BZ11 118 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 HLA-DOBP13765 273 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 ZNF43P17038 809 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 PAX7P23759 505 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 TTKP33981 857 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 MS4A18Q3C1V0 323 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 TBRG1Q3YBR2 411 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 PHYHD1Q5SRE7 291 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 NIPAL3Q6P499 406 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 KLHL17Q6TDP4 642 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 RBM45Q8IUH3 476 aaKnown RBP15.11■□□□□ 0.01
SMG6-212ENST00000573153 MOGAT1Q96PD6 335 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 ECSITQ9BQ95 431 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 BDH2Q9BUT1 245 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 ZNF426Q9BUY5 554 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 SEC61A2Q9H9S3 476 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 MRPL39Q9NYK5 338 aaKnown RBP15.11■□□□□ 0.01
SMG6-212ENST00000573153 CRNNQ9UBG3 495 aaPredicted RBP15.11■□□□□ 0.01
SMG6-212ENST00000573153 USP22Q9UPT9 525 aa15.11■□□□□ 0.01
SMG6-212ENST00000573153 ARPC4-TTLL3A0A0A6YYG9 625 aa15.1■□□□□ 0.01
SMG6-212ENST00000573153 IGHV1-18A0A0C4DH31 117 aa15.1■□□□□ 0.01
SMG6-212ENST00000573153 ZNF587BE7ETH6 402 aa15.1■□□□□ 0.01
SMG6-212ENST00000573153 M0R1B8 84 aa15.1■□□□□ 0.01
SMG6-212ENST00000573153 SMAD7O15105 426 aaKnown RBP15.1■□□□□ 0.01
SMG6-212ENST00000573153 MT-ATP6P00846 226 aa15.1■□□□□ 0.01
SMG6-212ENST00000573153 ACVR1BP36896 505 aa15.1■□□□□ 0.01
SMG6-212ENST00000573153 SH3BGRP55822 239 aaPredicted RBP15.1■□□□□ 0.01
SMG6-212ENST00000573153 CLDN17P56750 224 aa15.1■□□□□ 0.01
SMG6-212ENST00000573153 ENTPD8Q5MY95 495 aa15.1■□□□□ 0.01
SMG6-212ENST00000573153 MYPOPQ86VE0 399 aaPredicted RBP15.1■□□□□ 0.01
SMG6-212ENST00000573153 PIAS4Q8N2W9 510 aaPredicted RBP15.1■□□□□ 0.01
SMG6-212ENST00000573153 RP9Q8TA86 221 aaKnown RBP15.1■□□□□ 0.01
SMG6-212ENST00000573153 MAGEE2Q8TD90 523 aaPredicted RBP15.1■□□□□ 0.01
SMG6-212ENST00000573153 ADAMTS16Q8TE57 1224 aa15.1■□□□□ 0.01
SMG6-212ENST00000573153 MPP4Q96JB8 637 aa15.1■□□□□ 0.01
SMG6-212ENST00000573153 OR2M2Q96R28 347 aa15.1■□□□□ 0.01
SMG6-212ENST00000573153 DHRS9Q9BPW9 319 aa15.1■□□□□ 0.01
SMG6-212ENST00000573153 SLC19A3Q9BZV2 496 aa15.1■□□□□ 0.01
SMG6-212ENST00000573153 POLR2J2Q9GZM3 115 aaKnown RBP15.1■□□□□ 0.01
SMG6-212ENST00000573153 POLR2J3Q9H1A7 115 aaKnown RBP15.1■□□□□ 0.01
SMG6-212ENST00000573153 AP3M1Q9Y2T2 418 aa15.1■□□□□ 0.01
SMG6-212ENST00000573153 LOC100653049A0A140TA62 436 aa15.09■□□□□ 0.01
SMG6-212ENST00000573153 TRAPPC13A5PLN9 417 aa15.09■□□□□ 0.01
SMG6-212ENST00000573153 FAM220BPB1ANY3 271 aa15.09■□□□□ 0.01
SMG6-212ENST00000573153 ATP6V1G2-DDX39BF2Z307 99 aa15.09■□□□□ 0.01
SMG6-212ENST00000573153 KRT34O76011 436 aa15.09■□□□□ 0.01
SMG6-212ENST00000573153 IGLV1-44P01699 117 aa15.09■□□□□ 0.01
SMG6-212ENST00000573153 HOXB1P14653 301 aaPredicted RBP15.09■□□□□ 0.01
SMG6-212ENST00000573153 CLEC12BQ2HXU8 276 aa15.09■□□□□ 0.01
SMG6-212ENST00000573153 MST1LQ2TV78 715 aa15.09■□□□□ 0.01
SMG6-212ENST00000573153 SLC26A7Q8TE54 656 aa15.09■□□□□ 0.01
SMG6-212ENST00000573153 AKAP8O43823 692 aaKnown RBP15.08■□□□□ 0
SMG6-212ENST00000573153 CCDC22O60826 627 aa15.08■□□□□ 0
SMG6-212ENST00000573153 SLC43A1O75387 559 aa15.08■□□□□ 0
SMG6-212ENST00000573153 WNT11O96014 354 aa15.08■□□□□ 0
SMG6-212ENST00000573153 CBLP22681 906 aa15.08■□□□□ 0
SMG6-212ENST00000573153 PRPS1P60891 318 aa15.08■□□□□ 0
SMG6-212ENST00000573153 TUBA1BP68363 451 aa15.08■□□□□ 0
SMG6-212ENST00000573153 TUBA4AP68366 448 aa15.08■□□□□ 0
SMG6-212ENST00000573153 SF3A3Q12874 501 aaKnown RBP eCLIP15.08■□□□□ 0
SMG6-212ENST00000573153 C3orf36Q3SXR2 165 aa15.08■□□□□ 0
SMG6-212ENST00000573153 TUBA1AQ71U36 451 aa15.08■□□□□ 0
SMG6-212ENST00000573153 ARPINQ7Z6K5 226 aa15.08■□□□□ 0
SMG6-212ENST00000573153 PRSS27Q9BQR3 290 aa15.08■□□□□ 0
SMG6-212ENST00000573153 ASPNQ9BXN1 380 aa15.08■□□□□ 0
SMG6-212ENST00000573153 MOV10Q9HCE1 1003 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms