RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 MOKQ9UQ07 419 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 MRPS2Q9Y399 296 aaKnown RBP9.84□□□□□ -0.83
CCDC40-207ENST00000572253 OR10H1Q9Y4A9 318 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 GON4LQ3T8J9 2241 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 OR6C68A6NDL8 312 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 F5H5P2 479 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 CYR61O00622 381 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 CDK2AP1O14519 115 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 PLRG1O43660 514 aaKnown RBP9.84□□□□□ -0.83
CCDC40-207ENST00000572253 B3GALNT1O75752 331 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 EML2O95834 649 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 CBX7O95931 251 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 HIST1H2ABP04908 130 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 OR8G3PP0DMU2 310 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 MAZP56270 477 aaKnown RBP9.84□□□□□ -0.83
CCDC40-207ENST00000572253 RAB38P57729 211 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 LTBQ06643 244 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 MGAT2Q10469 447 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 FHL1Q13642 323 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 GK2Q14410 553 aaPredicted RBP9.84□□□□□ -0.83
CCDC40-207ENST00000572253 SEZ6L2Q6UXD5 910 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 TMUB2Q71RG4 321 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 HIST3H2AQ7L7L0 130 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 OOSP2Q86WS3 158 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 DND1Q8IYX4 353 aaKnown RBP9.84□□□□□ -0.83
CCDC40-207ENST00000572253 CA13Q8N1Q1 262 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 SDR16C5Q8N3Y7 309 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 ZNF676Q8N7Q3 588 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 ZNF417Q8TAU3 575 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 HIST1H2ACQ93077 130 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 ZNF578Q96N58 590 aaPredicted RBP9.84□□□□□ -0.83
CCDC40-207ENST00000572253 GFI1Q99684 422 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 ELOA3DA6NLF2 546 aaPredicted RBP9.84□□□□□ -0.83
CCDC40-207ENST00000572253 HMSDA8MTL9 139 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 FAM171A2A8MVW0 826 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 C2orf74A8MZ97 194 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 IDSB3KWA1 339 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 GALR3O60755 368 aaPredicted RBP9.84□□□□□ -0.83
CCDC40-207ENST00000572253 RGS11O94810 467 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 PLAURQ03405 335 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 ELOA3BQ3SY89 546 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 B3GNTL1Q67FW5 361 aaPredicted RBP9.84□□□□□ -0.83
CCDC40-207ENST00000572253 FAM122CQ6P4D5 195 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 LINC00114Q6XXX2 140 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 PRSS41Q7RTY9 318 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 BMPERQ8N8U9 685 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 TMEM52Q8NDY8 209 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 ELOA3Q8NG57 546 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 THRSPQ92748 146 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 LMF2Q9BU23 707 aaKnown RBP9.84□□□□□ -0.83
CCDC40-207ENST00000572253 TSPAN10Q9H1Z9 355 aaPredicted RBP9.84□□□□□ -0.83
CCDC40-207ENST00000572253 TMEM74BQ9NUR3 256 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 SLC6A5Q9Y345 797 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 A0A087WUJ7 227 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 OR2M5A3KFT3 312 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 A8MUA0 341 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 GLSO94925 669 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-207ENST00000572253 GUSBP08236 651 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 MAP2K6P52564 334 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 SEC13P55735 322 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 SCAND1P57086 179 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 HLXQ14774 488 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-207ENST00000572253 ARSKQ6UWY0 536 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 ALKAL2Q6UX46 152 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 ZNF440Q8IYI8 595 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 ZDHHC1Q8WTX9 485 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 CTHRC1Q96CG8 243 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 GDE1Q9NZC3 331 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 PILRAQ9UKJ1 303 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 PCDHGA5Q9Y5G8 931 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 TMEM72A0PK05 275 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 MFSD2BA6NFX1 497 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 OR6C65A6NJZ3 312 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 BLOC1S5-TXNDC5H3BN57 136 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 CTNSO60931 367 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 NANOS3P60323 173 aaKnown RBP9.83□□□□□ -0.84
CCDC40-207ENST00000572253 NFATC4Q14934 902 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 ZNF141Q15928 474 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 TANGO2Q6ICL3 276 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 NAXDQ8IW45 347 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 PDZD9Q8IXQ8 264 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 ZNF511Q8NB15 262 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 PNPLA2Q96AD5 504 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 AIFM2Q9BRQ8 373 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 NMNAT2Q9BZQ4 307 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 SLC19A3Q9BZV2 496 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 WSB2Q9NYS7 404 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-207ENST00000572253 FBXO9Q9UK97 447 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-207ENST00000572253 MRPS33Q9Y291 106 aaKnown RBP9.83□□□□□ -0.84
CCDC40-207ENST00000572253 DOCK9Q9BZ29 2069 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 SCN2AQ99250 2005 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 PYCARD-AS1I3L0S3 204 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 SUSD5O60279 629 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 PTHLHP12272 177 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 PVRP15151 417 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 MAGEB1P43366 347 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 MECP2P51608 486 aaKnown RBP9.83□□□□□ -0.84
CCDC40-207ENST00000572253 SLC25A1P53007 311 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 ADPRHP54922 357 aa9.83□□□□□ -0.84
CCDC40-207ENST00000572253 BTN1A1Q13410 526 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms