RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 RNF122Q9H9V4 155 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 SEC14L4Q9UDX3 406 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 TRAPPC4Q9Y296 219 aa11.81□□□□□ -0.52
CCDC40-205ENST00000571028 A0A1W2PNV4 684 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 OR2T1O43869 369 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 NPIPB7O75200 414 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 SEMG1P04279 462 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 H1F0P07305 194 aaKnown RBP11.8□□□□□ -0.52
CCDC40-205ENST00000571028 NQO1P15559 274 aaKnown RBP11.8□□□□□ -0.52
CCDC40-205ENST00000571028 RHCEP18577 417 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 GRPRP30550 384 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 PTH2RP49190 550 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 LSM11P83369 360 aaKnown RBP eCLIP11.8□□□□□ -0.52
CCDC40-205ENST00000571028 FAM69AQ5T7M9 428 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 TMEM225Q6GV28 225 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 VWA1Q6PCB0 445 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 TBPL2Q6SJ96 375 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 LINC00114Q6XXX2 140 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 ZNF730Q6ZMV8 503 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 RRM2BQ7LG56 351 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.8□□□□□ -0.52
CCDC40-205ENST00000571028 GPAT4Q86UL3 456 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 OFCC1Q8IZS5 231 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 KDM8Q8N371 416 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 MFSD8Q8NHS3 518 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 RNF128Q8TEB7 428 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 ZFP3Q96NJ6 502 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 MOGAT1Q96PD6 335 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 TMEM43Q9BTV4 400 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 MED18Q9BUE0 208 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 ASPNQ9BXN1 380 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 MMADHCQ9H3L0 296 aaPredicted RBP11.8□□□□□ -0.52
CCDC40-205ENST00000571028 PIGMQ9H3S5 423 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 C12orf49Q9H741 205 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 NMNAT1Q9HAN9 279 aaPredicted RBP11.8□□□□□ -0.52
CCDC40-205ENST00000571028 EMC9Q9Y3B6 208 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 MED31Q9Y3C7 131 aa11.8□□□□□ -0.52
CCDC40-205ENST00000571028 AQP12BA6NM10 295 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 M0R082 166 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 EIF1BO60739 113 aaKnown RBP11.79□□□□□ -0.52
CCDC40-205ENST00000571028 CYTIPO60759 359 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 SERPINI2O75830 405 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 GADD45GO95257 159 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 BGLAPP02818 100 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 HIST1H2ABP04908 130 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 THRBP10828 461 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 IFI30P13284 250 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 RRM2P31350 389 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 PPP1R8Q12972 351 aaKnown RBP11.79□□□□□ -0.52
CCDC40-205ENST00000571028 PMS2P3Q13401 168 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 RNPS1Q15287 305 aaKnown RBP11.79□□□□□ -0.52
CCDC40-205ENST00000571028 TMEM201Q5SNT2 666 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 C5orf46Q6UWT4 87 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 HIST3H2AQ7L7L0 130 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 BTLAQ7Z6A9 289 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 AQP12AQ8IXF9 295 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 ADGRG5Q8IZF4 528 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 SLC43A2Q8N370 569 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 LRRC17Q8N6Y2 441 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 PIK3C3Q8NEB9 887 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 ZNF417Q8TAU3 575 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 PIGXQ8TBF5 258 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 CANT1Q8WVQ1 401 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 HIST1H2ACQ93077 130 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 UTP4Q969X6 686 aaKnown RBP11.79□□□□□ -0.52
CCDC40-205ENST00000571028 SGTBQ96EQ0 304 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 GMPPAQ96IJ6 420 aaPredicted RBP11.79□□□□□ -0.52
CCDC40-205ENST00000571028 HS6ST2Q96MM7 605 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 ZNF587Q96SQ5 575 aaPredicted RBP11.79□□□□□ -0.52
CCDC40-205ENST00000571028 CXorf56Q9H5V9 222 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 IL1RAPQ9NPH3 570 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 MEPEQ9NQ76 525 aaPredicted RBP11.79□□□□□ -0.52
CCDC40-205ENST00000571028 MAN2C1Q9NTJ4 1040 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 C20orf141Q9NUB4 165 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 KLHL9Q9P2J3 617 aa11.79□□□□□ -0.52
CCDC40-205ENST00000571028 ZANQ9Y493 2812 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 A0A087WUU8 490 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 TRBV4-1A0A0J9YWV2 114 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 DHRS12A0PJE2 317 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 C11orf98E9PRG8 122 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 DNPH1O43598 174 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 TNFSF13O75888 250 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 PRSS23O95084 383 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 F12P00748 615 aaPredicted RBP11.78□□□□□ -0.52
CCDC40-205ENST00000571028 AHCYP23526 432 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 RBM34P42696 430 aaKnown RBP11.78□□□□□ -0.52
CCDC40-205ENST00000571028 KIR2DL2P43627 348 aaPredicted RBP11.78□□□□□ -0.52
CCDC40-205ENST00000571028 C1DQ13901 141 aaKnown RBP11.78□□□□□ -0.52
CCDC40-205ENST00000571028 ZNF74Q16587 644 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 EXOC3L2Q2M3D2 409 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 IQCCQ4KMZ1 466 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 PAQR6Q6TCH4 344 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 FAM214BQ7L5A3 538 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 NUFIP2Q7Z417 695 aaKnown RBP11.78□□□□□ -0.52
CCDC40-205ENST00000571028 NRMQ8IXM6 262 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 TMEM171Q8WVE6 324 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 PSD2Q9BQI7 771 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 CHID1Q9BWS9 393 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 KLHL4Q9C0H6 718 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 OPN3Q9H1Y3 402 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms