RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 FDCSPQ8NFU4 85 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 OR7G3Q8NG95 312 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 RDH11Q8TC12 318 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 PNPLA2Q96AD5 504 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 MS4A6EQ96DS6 147 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 RBM18Q96H35 190 aaKnown RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 NTMT1Q9BV86 223 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 TXLNGYQ9BZA5 131 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 ILKAPQ9H0C8 392 aaPredicted RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 STMN4Q9H169 189 aaPredicted RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 WNT5BQ9H1J7 359 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 ANKZF1Q9H8Y5 726 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 WDR41Q9HAD4 459 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 ZNF160Q9HCG1 818 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 LYRM4Q9HD34 91 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 PFDN4Q9NQP4 134 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 SENP1Q9P0U3 644 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 CRNNQ9UBG3 495 aaPredicted RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 PHF11Q9UIL8 331 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 ZNF490Q9ULM2 529 aaPredicted RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 TMEM5Q9Y2B1 443 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 TP53TG5Q9Y2B4 290 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 MRPS2Q9Y399 296 aaKnown RBP3.43□□□□□ -1.86
NUP88-202ENST00000570937 MMACHCQ9Y4U1 282 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 CLCA3PQ9Y6N3 262 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 AHCTF1Q8WYP5 2266 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 LAMA5O15230 3695 aa3.43□□□□□ -1.86
NUP88-202ENST00000570937 CHD6Q8TD26 2715 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 A0A0J9YWU9 116 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 ZNF860A6NHJ4 632 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 GOLGA6L10A6NI86 522 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 A8MUI8 341 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 GOLGA8RI6L899 631 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 J3QKU1 62 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 OR7A17O14581 309 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 CTNSO60931 367 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 SEMA3DO95025 777 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 SIX3O95343 332 aaPredicted RBP3.42□□□□□ -1.86
NUP88-202ENST00000570937 PGM3O95394 542 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 BCL10O95999 233 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 PRB1P04280 392 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 IFNA16P05015 189 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 SMIM10L1P0DMW3 83 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 COX6A1P12074 109 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 CPA3P15088 417 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 EPORP19235 508 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 TNNI3P19429 210 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 CPN2P22792 545 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 ATP5A1P25705 553 aaKnown RBP3.42□□□□□ -1.86
NUP88-202ENST00000570937 GCAP28676 217 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 SSR2P43308 183 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 NKX2-1P43699 371 aaPredicted RBP3.42□□□□□ -1.86
NUP88-202ENST00000570937 LIM2P55344 173 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 PKNOX1P55347 436 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 RAB38P57729 211 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 OR4D2P58180 307 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 VSNL1P62760 191 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 ARG2P78540 354 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 SLAMF1Q13291 335 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 RAPSNQ13702 412 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 ADPRMQ3LIE5 342 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 GGTA1PQ4G0N0 100 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 SFT2D3Q587I9 215 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 FBXO48Q5FWF7 155 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 ELFN2Q5R3F8 820 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 C6orf163Q5TEZ5 329 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 TMEM211Q6ICI0 200 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 LINC00696Q6ZRV3 163 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 GPRIN3Q6ZVF9 776 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 ANKRD37Q7Z713 158 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 ZNF440Q8IYI8 595 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 KIRREL3Q8IZU9 778 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 IQCKQ8N0W5 287 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 CA13Q8N1Q1 262 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 MREGQ8N565 214 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 CCNYL1Q8N7R7 359 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 GBP7Q8N8V2 638 aaPredicted RBP3.42□□□□□ -1.86
NUP88-202ENST00000570937 ACOT4Q8N9L9 421 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 MORN4Q8NDC4 146 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 KBTBD8Q8NFY9 601 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 OR5AP2Q8NGF4 316 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 OR5T3Q8NGG3 340 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 OR52N5Q8NH56 324 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 M1APQ8TC57 530 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 AENQ8WTP8 325 aaKnown RBP3.42□□□□□ -1.86
NUP88-202ENST00000570937 C8orf44Q96CB5 159 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 TMCO6Q96DC7 493 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 L3HYPDHQ96EM0 354 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 SMIM10Q96HG1 83 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 MAGED4Q96JG8 741 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 CNDP1Q96KN2 507 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 ZNF382Q96SR6 550 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 PELOQ9BRX2 385 aaKnown RBP3.42□□□□□ -1.86
NUP88-202ENST00000570937 NUDT9Q9BW91 350 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 MS4A8Q9BY19 250 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 PARD6BQ9BYG5 372 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 TRIM15Q9C019 465 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 SPNS1Q9H2V7 528 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 OR51B5Q9H339 312 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms