RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 AQP6Q13520 282 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 GK2Q14410 553 aaPredicted RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 PTGR1Q14914 329 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 ARL6IP1Q15041 203 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 P2RY14Q15391 338 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 INPP5JQ15735 1006 aaPredicted RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 EFNB3Q15768 340 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 PHKG1Q16816 387 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 COL28A1Q2UY09 1125 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 LIN52Q52LA3 116 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 ZNF678Q5SXM1 525 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 GPRC6AQ5T6X5 926 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 SERTAD4-AS1Q5TG53 156 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 MEDAGQ5VYS4 303 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 REEP3Q6NUK4 255 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 ZNF544Q6NX49 715 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 FAM199XQ6PEV8 388 aaPredicted RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 KCNIP4Q6PIL6 250 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 EPGNQ6UW88 154 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 SCIMPQ6UWF3 145 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 FAM198BQ6UWH4 519 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 SBSNQ6UWP8 590 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 CYHR1Q6ZMK1 362 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 C3P1Q6ZMU1 363 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 IL17RELQ6ZVW7 336 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 ASB18Q6ZVZ8 466 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 USP43Q70EL4 1123 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 HIST3H2AQ7L7L0 130 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 UBE3DQ7Z6J8 389 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 PLXDC1Q8IUK5 500 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 STHQ8IWL8 128 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 LAX1Q8IWV1 398 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 ADHFE1Q8IWW8 467 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 TDHQ8IZJ6 230 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 MTURNQ8N3F0 131 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 Q8N402 240 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 SLC44A3Q8N4M1 653 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 LILRA3Q8N6C8 439 aaPredicted RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 LMNTD1Q8N9Z9 388 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 TERB1Q8NA31 727 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 FAM46DQ8NEK8 389 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 OR7G2Q8NG99 324 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 OR1L4Q8NGR5 311 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 OR6X1Q8NH79 312 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 MAFAQ8NHW3 353 aaPredicted RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 NUBPLQ8TB37 319 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 HMGCLL1Q8TB92 370 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 RDH11Q8TC12 318 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 MRAPQ8TCY5 172 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 WFIKKN2Q8TEU8 576 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 KCNJ9Q92806 393 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 KLK6Q92876 244 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 CDS1Q92903 461 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 NAT6Q93015 286 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 MCHR2Q969V1 340 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 ZBTB8AQ96BR9 441 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 MSI2Q96DH6 328 aaKnown RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 SCRN2Q96FV2 425 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 ZNF597Q96LX8 424 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 HARBI1Q96MB7 349 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 PRAP1Q96NZ9 151 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 HIST1H2AAQ96QV6 131 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 LYSMD1Q96S90 227 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 SEPHS2Q99611 448 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 NRTNQ99748 197 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 ECSITQ9BQ95 431 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 RIOK2Q9BVS4 552 aaKnown RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 TRMT61BQ9BVS5 477 aaKnown RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 DDA1Q9BW61 102 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 SLC2A11Q9BYW1 496 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 ULBP2Q9BZM5 246 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 PCBD2Q9H0N5 130 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 C1orf198Q9H425 327 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 TUBB1Q9H4B7 451 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 ABCB9Q9NP78 766 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 PRSS16Q9NQE7 514 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 RAD18Q9NS91 495 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 SMOXQ9NWM0 555 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 ANKRD10Q9NXR5 420 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 BABAM2Q9NXR7 383 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 VNN3Q9NY84 501 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 TAS2R13Q9NYV9 303 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 NKX1-2Q9UD57 310 aaPredicted RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 ZNF225Q9UK10 706 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 PACSIN3Q9UKS6 424 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 RAB26Q9ULW5 256 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 PRPF19Q9UMS4 504 aaKnown RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 ZFR2Q9UPR6 939 aaKnown RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 ICKQ9UPZ9 632 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 PSG11Q9UQ72 335 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 BTRCQ9Y297 605 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 SLC27A6Q9Y2P4 619 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 RAP2CQ9Y3L5 183 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 CSDC2Q9Y534 153 aaKnown RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 KLK4Q9Y5K2 254 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 TSSC4Q9Y5U2 329 aaPredicted RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 NUBP2Q9Y5Y2 271 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 MRPS18BQ9Y676 258 aaKnown RBP3.24□□□□□ -1.89
SMG6-208ENST00000570874 SLC22A7Q9Y694 548 aa3.24□□□□□ -1.89
SMG6-208ENST00000570874 X6R8D5 127 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms