RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 P2RY4P51582 365 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 RPS6KA3P51812 740 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 AGFG1P52594 562 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 MYBPC1Q00872 1141 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 IL5RAQ01344 420 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 POU3F1Q03052 451 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 MS4A18Q3C1V0 323 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 PRR30Q53SZ7 412 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 PCSK4Q6UW60 755 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 GPAT4Q86UL3 456 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 CCDC71Q8IV32 467 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 CCDC103Q8IW40 242 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 KDM8Q8N371 416 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 LNX2Q8N448 690 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 LSM14AQ8ND56 463 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 ANKK1Q8NFD2 765 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 FAR1Q8WVX9 515 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 PLEKHA8Q96JA3 519 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 PRDM14Q9GZV8 571 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 NRIP3Q9NQ35 241 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 KLHL13Q9P2N7 655 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 ADAM18Q9Y3Q7 739 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 BSNQ9UPA5 3926 aa13.79□□□□□ -0.2
HERPUD1-219ENST00000570273 SMG1Q96Q15 3661 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 KALRNO60229 2985 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 A0A1W2PRG6 482 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 ZNHIT1O43257 154 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 PCYT1AP49585 367 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 H3F3AP84243 136 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 MED21Q13503 144 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 C1DQ13901 141 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 SNAPC1Q16533 368 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 KRTCAP3Q53RY4 240 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 SLC35F1Q5T1Q4 408 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 ZNF324BQ6AW86 544 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 TMEM225Q6GV28 225 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 KRT80Q6KB66 452 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 THAP5Q7Z6K1 395 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 UEVLDQ8IX04 471 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 PM20D2Q8IYS1 436 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 ROBO4Q8WZ75 1007 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 SNRNP40Q96DI7 357 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 TSPAN32Q96QS1 320 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 TUBA1CQ9BQE3 449 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 B3GAT1Q9P2W7 334 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 MCTS1Q9ULC4 181 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 RNF6Q9Y252 685 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 LRCH1Q9Y2L9 728 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 PIEZO2Q9H5I5 2752 aa13.78□□□□□ -0.2
HERPUD1-219ENST00000570273 TLN1Q9Y490 2541 aaKnown RBP13.77□□□□□ -0.2
HERPUD1-219ENST00000570273 TEX13CA0A0J9YWL9 993 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 OR14I1A6ND48 311 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 RIIAD1A6NNX1 92 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 ARPC3O15145 178 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 VAMP5O95183 116 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 IFNGP01579 166 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 HLA-DOBP13765 273 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 APEHP13798 732 aaKnown RBP13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 DAP3P51398 398 aaKnown RBP13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 PON3Q15166 354 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 ACKR1Q16570 336 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 GPR139Q6DWJ6 353 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 ABLIM2Q6H8Q1 611 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 PTCHD4Q6ZW05 846 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 FCRLAQ7L513 359 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 PXKQ7Z7A4 578 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 OR5M9Q8NGP3 310 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 RASD2Q96D21 266 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 Q96M85 177 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 OXGR1Q96P68 337 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 PRRG4Q9BZD6 226 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 FANCFQ9NPI8 374 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 RASSF1Q9NS23 344 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 GRHPRQ9UBQ7 328 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 NOX1Q9Y5S8 564 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 HSPE1-MOB4S4R3N1 261 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 FAM208BQ5VWN6 2430 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 ZNF407Q9C0G0 2248 aa13.77□□□□□ -0.21
HERPUD1-219ENST00000570273 CLCA1A8K7I4 914 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 IMPA2O14732 288 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 SURF4O15260 269 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 IDH3BO43837 385 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 PRKYO43930 277 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 SLC2A10O95528 541 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 IGHMP01871 453 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 ZNF43P17038 809 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 SDHAP31040 664 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 PTGS2P35354 604 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 TDGF1P3P51864 188 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 RPL27P61353 136 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 KRR1Q13601 381 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 MELKQ14680 651 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 EEF1A1P5Q5VTE0 462 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 SLC35D2Q76EJ3 337 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 FAM122BQ7Z309 247 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 FGD2Q7Z6J4 655 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 JAZF1Q86VZ6 243 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 ENTHD1Q8IYW4 607 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 MARVELD2Q8N4S9 558 aa13.76□□□□□ -0.21
HERPUD1-219ENST00000570273 TCEANCQ8N8B7 351 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms