RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 PRAMEF7Q5VXH5 474 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 CCDC121Q6ZUS5 278 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 TREML1Q86YW5 311 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 OR8J3Q8NGG0 315 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 OR1K1Q8NGR3 316 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 STK35Q8TDR2 534 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 VPS33AQ96AX1 596 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 LRRC58Q96CX6 371 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 SLC38A2Q96QD8 506 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 MMADHCQ9H3L0 296 aaPredicted RBP11.46□□□□□ -0.57
SPG7-221ENST00000569720 MOV10Q9HCE1 1003 aaKnown RBP11.46□□□□□ -0.57
SPG7-221ENST00000569720 NDUFS8O00217 210 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 FBP2O00757 339 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 LGI1O95970 557 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 GZMKP49863 264 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 SELENOPP49908 381 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 MVDP53602 400 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 LSM11P83369 360 aaKnown RBP eCLIP11.45□□□□□ -0.585e-8■□□□□ 10.3
SPG7-221ENST00000569720 NFYCQ13952 458 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 MAPK11Q15759 364 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 SWI5Q1ZZU3 235 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 TBRG1Q3YBR2 411 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 DNAL1Q4LDG9 190 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 ZNF311Q5JNZ3 666 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 REP15Q6BDI9 236 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 NIPAL3Q6P499 406 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 DLEU7Q6UYE1 221 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 CREB3L2Q70SY1 520 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 DHDDSQ86SQ9 333 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 CLIP4Q8N3C7 705 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 SLC38A5Q8WUX1 472 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 POP5Q969H6 163 aaKnown RBP11.45□□□□□ -0.58
SPG7-221ENST00000569720 C3orf49Q96BT1 292 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 TMEM19Q96HH6 336 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 PIMREGQ9BSJ6 248 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 KATNB1Q9BVA0 655 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 PAIP1Q9H074 479 aaKnown RBP11.45□□□□□ -0.58
SPG7-221ENST00000569720 SHARPINQ9H0F6 387 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 SLC6A13Q9NSD5 602 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 ARL8BQ9NVJ2 186 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 RPS6KB2Q9UBS0 482 aa11.45□□□□□ -0.58
SPG7-221ENST00000569720 IGHV1-18A0A0C4DH31 117 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 VSTM5A8MXK1 200 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 B9A039 149 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 C5orf58C9J3I9 102 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 UBOX5O94941 541 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 PRG2P13727 222 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 HOXB1P14653 301 aaPredicted RBP11.44□□□□□ -0.58
SPG7-221ENST00000569720 ZNF43P17038 809 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 GPX2P18283 190 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 SERPINF1P36955 418 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 P2RY4P51582 365 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 SH3BGRP55822 239 aaPredicted RBP11.44□□□□□ -0.58
SPG7-221ENST00000569720 RUNDC3AQ59EK9 446 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 RPS26P11Q5JNZ5 115 aaPredicted RBP11.44□□□□□ -0.58
SPG7-221ENST00000569720 PAGE3Q5JUK9 113 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 ANKRD16Q6P6B7 361 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 SLC46A3Q7Z3Q1 461 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 SERPINA11Q86U17 422 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 SLC30A8Q8IWU4 369 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 PHC2Q8IXK0 858 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 PGAM4Q8N0Y7 254 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 MFSD8Q8NHS3 518 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 MAGEE2Q8TD90 523 aaPredicted RBP11.44□□□□□ -0.58
SPG7-221ENST00000569720 NANOS1Q8WY41 292 aaKnown RBP11.44□□□□□ -0.58
SPG7-221ENST00000569720 SLC35B4Q969S0 331 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 SLC25A36Q96CQ1 311 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 ANKRD27Q96NW4 1050 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 ALKBH3Q96Q83 286 aaPredicted RBP11.44□□□□□ -0.58
SPG7-221ENST00000569720 CGREF1Q99674 301 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 VRK1Q99986 396 aaPredicted RBP11.44□□□□□ -0.58
SPG7-221ENST00000569720 LINC00470Q9BZP3 86 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 MYOZ1Q9NP98 299 aaPredicted RBP11.44□□□□□ -0.58
SPG7-221ENST00000569720 FBXO9Q9UK97 447 aaPredicted RBP11.44□□□□□ -0.58
SPG7-221ENST00000569720 PCDHB14Q9Y5E9 798 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 MALRD1Q5VYJ5 2156 aa11.44□□□□□ -0.58
SPG7-221ENST00000569720 TRBV5-3A0A0A0MS03 114 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 ARPC4-TTLL3A0A0A6YYG9 625 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 B2RBV5 119 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 TMEM229AB2RXF0 380 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 CLIC1O00299 241 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 AIM2O14862 343 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 LMX1BO60663 402 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 NPIPB7O75200 414 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 PDE5AO76074 875 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 LY6HO94772 140 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 T-ENOLP0DO92 83 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 IGHV4-31P0DP07 118 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 ZNF16P17020 682 aaPredicted RBP11.43□□□□□ -0.58
SPG7-221ENST00000569720 MXRA7P84157 204 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 GGTLC2Q14390 218 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 CARTPTQ16568 116 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 MST1LQ2TV78 715 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 C3orf36Q3SXR2 165 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 C8orf82Q6P1X6 216 aaPredicted RBP11.43□□□□□ -0.58
SPG7-221ENST00000569720 SLC2A7Q6PXP3 512 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 RETREG3Q86VR2 466 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 LSRQ86X29 649 aaPredicted RBP11.43□□□□□ -0.58
SPG7-221ENST00000569720 EPHX4Q8IUS5 362 aa11.43□□□□□ -0.58
SPG7-221ENST00000569720 ANKK1Q8NFD2 765 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms