RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 FAM3DQ96BQ1 224 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 NOX4Q9NPH5 578 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 UQCC1Q9NVA1 299 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 TMEM235A6NFC5 223 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 IQCF5A8MTL0 148 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 MPIG6BO95866 241 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 RPL12P30050 165 aaKnown RBP6.61□□□□□ -1.35
CNOT1-216ENST00000569240 CCR6P51684 374 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 EFNA3P52797 238 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 IL10RAQ13651 578 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 ALKBH1Q13686 389 aaKnown RBP6.61□□□□□ -1.35
CNOT1-216ENST00000569240 EXOSC6Q5RKV6 272 aaKnown RBP6.61□□□□□ -1.35
CNOT1-216ENST00000569240 DNLZQ5SXM8 178 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 RIPPLY2Q5TAB7 128 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 DCXRQ7Z4W1 244 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 MRPL52Q86TS9 123 aaKnown RBP6.61□□□□□ -1.35
CNOT1-216ENST00000569240 GPR152Q8TDT2 470 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 AMDHD1Q96NU7 426 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 PIGQQ9BRB3 760 aa6.61□□□□□ -1.35
CNOT1-216ENST00000569240 PDGFDQ9GZP0 370 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-216ENST00000569240 TIAM2Q8IVF5 1701 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 C2orf78A6NCI8 922 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF729A6NN14 1252 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 A8MX80 341 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 VSTM5A8MXK1 200 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF814B7Z6K7 855 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 KNG1P01042 644 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 GASTP01350 101 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 EPXP11678 715 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 SHC1P29353 583 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 MZT1Q08AG7 82 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 TMEM107Q6UX40 140 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 NAXEQ8NCW5 288 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 DMRT3Q9NQL9 472 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 SPANXA1Q9NS26 97 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 MARCH4Q9P2E8 410 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 C19orf25Q9UFG5 118 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 FIGNL2A6NMB9 653 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF724A8MTY0 619 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF727A8MUV8 499 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 STBD1O95210 358 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ACP5P13686 325 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 KITLGP21583 273 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 MLLT10P55197 1068 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 MALLQ13021 153 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 PIN1Q13526 163 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 TARBP2Q15633 366 aaKnown RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 LSRQ86X29 649 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 GKN2Q86XP6 184 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 CPA6Q8N4T0 437 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 FAM160A2Q8N612 972 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 TMED6Q8WW62 240 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 RASD2Q96D21 266 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 SUCNR1Q9BXA5 334 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 PARD6AQ9NPB6 346 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 PLEKHJ1Q9NW61 149 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 EHFQ9NZC4 300 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 IL17CQ9P0M4 197 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ZDHHC8Q9ULC8 765 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 CSAG2Q9Y5P2 127 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 CDRT15L2A8MXV6 281 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 KCNAB3O43448 404 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 SOD1P00441 154 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 OR4E1P0C645 316 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 AADACP22760 399 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF140P52738 457 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 CLRN1P58418 232 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 HTRA3P83110 453 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 PLP2Q04941 152 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 CEBPEQ15744 281 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 MEP1BQ16820 701 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 PDLIM3Q53GG5 364 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF628Q5EBL2 1059 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 OR2G6Q5TZ20 316 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 LRFN4Q6PJG9 635 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 TMPRSS7Q7RTY8 843 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 OR5L2Q8NGL0 311 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 OR4K13Q8NH42 304 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 WDR20Q8TBZ3 569 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ANAPC16Q96DE5 110 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 APIPQ96GX9 242 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 RBM14Q96PK6 669 aaKnown RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 WDR76Q9H967 626 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 Q9N2K0 584 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 METTL1Q9UBP6 276 aaKnown RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ANTXRLA6NF34 631 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 G3V3Q6 166 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 KLK8O60259 260 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 CD68P34810 354 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-216ENST00000569240 SPCS3P61009 180 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 PAFAH1B2P68402 229 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 PSMG4Q5JS54 123 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 NCR3LG1Q68D85 454 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 CD300LDQ6UXZ3 194 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 DPPA3Q6W0C5 159 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 CLEC4CQ8WTT0 213 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 CRYGNQ8WXF5 182 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 FGGYQ96C11 551 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 ATF6BQ99941 703 aa6.6□□□□□ -1.35
CNOT1-216ENST00000569240 SLC17A9Q9BYT1 436 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms