RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 TRAV27A0A087WT01 109 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 GPR171O14626 319 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 DVL2O14641 736 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 HNRNPRO43390 633 aaKnown RBP15.96■□□□□ 0.15
COMMD4-222ENST00000568034 DEAF1O75398 565 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-222ENST00000568034 ADORA3P0DMS8 318 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 SAGP10523 405 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-222ENST00000568034 FPR3P25089 353 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 DNAJA1P31689 397 aaKnown RBP15.96■□□□□ 0.15
COMMD4-222ENST00000568034 AQP2P41181 271 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 GSSP48637 474 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 SLC9A3P48764 834 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 FXYD6P3P58550 94 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 TMEM201Q5SNT2 666 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 EEF1A1P5Q5VTE0 462 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 TFAP2EQ6VUC0 442 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 WDFY1Q8IWB7 410 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 HS3ST5Q8IZT8 346 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 LRRC75AQ8NAA5 344 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 MCCC2Q9HCC0 563 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 EMC3Q9P0I2 261 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 SIGLEC7Q9Y286 467 aa15.96■□□□□ 0.15
COMMD4-222ENST00000568034 ALPK2Q86TB3 2170 aa15.96■□□□□ 0.14
COMMD4-222ENST00000568034 FAM90A27PA6NNH2 459 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 C11orf98E9PRG8 122 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 BLOC1S5-TXNDC5H3BN57 136 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 PTP4A3O75365 173 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 CLDN14O95500 239 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 HIST1H2ABP04908 130 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 CD8BP10966 210 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 FCGR1AP12314 374 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 FASP25445 335 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 TFF3Q07654 80 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 SLC25A35Q3KQZ1 300 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 ZFP1Q6P2D0 407 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 HIST3H2AQ7L7L0 130 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.95■□□□□ 0.14
COMMD4-222ENST00000568034 PXKQ7Z7A4 578 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 GALNT5Q7Z7M9 940 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 AMIGO2Q86SJ2 522 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 CDK20Q8IZL9 346 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 OR10G2Q8NGC3 310 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 OR51A7Q8NH64 312 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 HIST1H2ACQ93077 130 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 TNFRSF13CQ96RJ3 184 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 OPN3Q9H1Y3 402 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-222ENST00000568034 PIGMQ9H3S5 423 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 C12orf49Q9H741 205 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 S100A14Q9HCY8 104 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 KRCC1Q9NPI7 259 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-222ENST00000568034 PLSCR4Q9NRQ2 329 aa15.95■□□□□ 0.14
COMMD4-222ENST00000568034 NOSIPQ9Y314 301 aaKnown RBP15.95■□□□□ 0.14
COMMD4-222ENST00000568034 MAGED1Q9Y5V3 778 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-222ENST00000568034 NKX2-6A6NCS4 301 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 ARRDC5A6NEK1 342 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 A8MXE2 369 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 GNGT2O14610 69 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 ZNF432O94892 652 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 GASTP01350 101 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 ZNF43P17038 809 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 AHCYP23526 432 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 OR3A2P47893 321 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 POU3F1Q03052 451 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-222ENST00000568034 SHQ1Q6PI26 577 aaKnown RBP15.94■□□□□ 0.14
COMMD4-222ENST00000568034 ZNF474Q6S9Z5 364 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-222ENST00000568034 OAFQ86UD1 273 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 UEVLDQ8IX04 471 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 LINC00471Q8N535 108 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 AQP11Q8NBQ7 271 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 GNPDA2Q8TDQ7 276 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 GIPC3Q8TF64 312 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 CA5BP1Q8WTZ4 195 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 TXNDC15Q96J42 360 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 PKP2Q99959 881 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 DGCR6LQ9BY27 220 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 PROCRQ9UNN8 238 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 NOX1Q9Y5S8 564 aa15.94■□□□□ 0.14
COMMD4-222ENST00000568034 UNC119BA6NIH7 251 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 EEF1E1-BLOC1S5C9J1V9 151 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 MSTNO14793 375 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 EEF1E1O43324 174 aaKnown RBP15.93■□□□□ 0.14
COMMD4-222ENST00000568034 RNF13O43567 381 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 E2F6O75461 281 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 OR6A2O95222 327 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 IFNGR2P38484 337 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 SELENOPP49908 381 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 CLDN17P56750 224 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 TSPAN31Q12999 210 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 FBXL19-AS1Q494R0 122 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 ANKDD1AQ495B1 522 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 ZBED5Q49AG3 693 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 ANKRD34AQ69YU3 496 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 THSD4Q6ZMP0 1018 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 ZNF610Q8N9Z0 462 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 ANKK1Q8NFD2 765 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 ENKD1Q9H0I2 346 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 MED29Q9NX70 200 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 PDP1Q9P0J1 537 aaPredicted RBP15.93■□□□□ 0.14
COMMD4-222ENST00000568034 PRSS50Q9UI38 385 aa15.93■□□□□ 0.14
COMMD4-222ENST00000568034 SPTAN1Q13813 2472 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms