RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 NIPAL3Q6P499 406 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 KLHL24Q6TFL4 600 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 CLEC9AQ6UXN8 241 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 Q71RC1 249 aaPredicted RBP6.06□□□□□ -1.44
SF3B3-209ENST00000567635 PATL1Q86TB9 770 aaKnown RBP6.06□□□□□ -1.44
SF3B3-209ENST00000567635 DTX2Q86UW9 622 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 CIARTQ8N365 385 aaPredicted RBP6.06□□□□□ -1.44
SF3B3-209ENST00000567635 KDM8Q8N371 416 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 SMYD1Q8NB12 490 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 OR6S1Q8NH40 331 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 OR10A6Q8NH74 314 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 SLC26A7Q8TE54 656 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 BCL2L2Q92843 193 aaPredicted RBP6.06□□□□□ -1.44
SF3B3-209ENST00000567635 LRRC58Q96CX6 371 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 EPYCQ99645 322 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 MCHR1Q99705 422 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 DHRS9Q9BPW9 319 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 ELAC2Q9BQ52 826 aaKnown RBP6.06□□□□□ -1.44
SF3B3-209ENST00000567635 ECSITQ9BQ95 431 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 WFDC6Q9BQY6 131 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 ASPNQ9BXN1 380 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 LINC00470Q9BZP3 86 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 NSRP1Q9H0G5 558 aaKnown RBP6.06□□□□□ -1.44
SF3B3-209ENST00000567635 ALG2Q9H553 416 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 NANOGQ9H9S0 305 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 FKRPQ9H9S5 495 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 OBP2BQ9NPH6 170 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 FGFR1OP2Q9NVK5 253 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 POU2F3Q9UKI9 436 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 B3GALT5Q9Y2C3 310 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 MAGED1Q9Y5V3 778 aaPredicted RBP6.06□□□□□ -1.44
SF3B3-209ENST00000567635 ATP23Q9Y6H3 246 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 NF1P21359 2839 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 MALRD1Q5VYJ5 2156 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 ZFHX3Q15911 3703 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 A0A0B4J2E0 115 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 A0A1B0GX12 115 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 TRIM64A6NGJ6 449 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 TRIM64BA6NI03 449 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 RPL36A-HNRNPH2H7BZ11 118 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 M0R082 166 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 FMO6PO60774 539 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 FZD7O75084 574 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 SLC43A1O75387 559 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 UPK3AO75631 287 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 ZNF432O94892 652 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 BGLAPP02818 100 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 HOXB4P17483 251 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-209ENST00000567635 CBLP22681 906 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 TTKP33981 857 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 PCGF2P35227 344 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 CDKN1AP38936 164 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 GZMMP51124 257 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 FABP6P51161 128 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 SH3BGRP55822 239 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-209ENST00000567635 UBE2NP61088 152 aaKnown RBP6.05□□□□□ -1.44
SF3B3-209ENST00000567635 ARF1P84077 181 aaKnown RBP6.05□□□□□ -1.44
SF3B3-209ENST00000567635 ROR2Q01974 943 aaKnown RBP6.05□□□□□ -1.44
SF3B3-209ENST00000567635 LTBQ06643 244 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 KLF10Q13118 480 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 PMS2P3Q13401 168 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 TNK1Q13470 666 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 ETFDHQ16134 617 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 NRF1Q16656 503 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 CLEC12BQ2HXU8 276 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 VMACQ2NL98 169 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 TRMT5Q32P41 509 aaKnown RBP6.05□□□□□ -1.44
SF3B3-209ENST00000567635 HIKESHIQ53FT3 197 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 ENTPD8Q5MY95 495 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 GKAP1Q5VSY0 366 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-209ENST00000567635 HMBOX1Q6NT76 420 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 ANKRD16Q6P6B7 361 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 ZNF613Q6PF04 617 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 LINC00114Q6XXX2 140 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 CCDC80Q76M96 950 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 LINGO2Q7L985 606 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 FBXL14Q8N1E6 418 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 GPR137CQ8N3F9 429 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 C10orf53Q8N6V4 93 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 CCDC197Q8NCU1 140 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 ADPRHL1Q8NDY3 354 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 GPR32P1Q8NGA4 272 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 OR6T1Q8NGN1 323 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 OR1K1Q8NGR3 316 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 ZNF417Q8TAU3 575 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 RASSF5Q8WWW0 418 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 SLC41A3Q96GZ6 507 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 POM121Q96HA1 1249 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 COX4I2Q96KJ9 171 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 ZNF587Q96SQ5 575 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-209ENST00000567635 ARHGDIGQ99819 225 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 SH3GL3Q99963 347 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 TMEM43Q9BTV4 400 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 TRAF4Q9BUZ4 470 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-209ENST00000567635 GPR35Q9HC97 309 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 SAR1AQ9NR31 198 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 GID8Q9NWU2 228 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 KLHL14Q9P2G3 628 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 B3GAT1Q9P2W7 334 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 SEC14L4Q9UDX3 406 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms