RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 TMEM89A2RUT3 159 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 M0R233 179 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 NCR1O76036 304 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 MSMBP08118 114 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 ALDOCP09972 364 aaKnown RBP13.31□□□□□ -0.28
PALB2-205ENST00000567003 ZNF43P17038 809 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 CBLP22681 906 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 NR4A1P22736 598 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 ARR3P36575 388 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 ETV4P43268 484 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 CLNS1AP54105 237 aaKnown RBP13.31□□□□□ -0.28
PALB2-205ENST00000567003 EGR4Q05215 589 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 C1orf229Q6ZS94 237 aaPredicted RBP13.31□□□□□ -0.28
PALB2-205ENST00000567003 PEG10Q86TG7 708 aaKnown RBP13.31□□□□□ -0.28
PALB2-205ENST00000567003 NUDCD3Q8IVD9 361 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 ZNF418Q8TF45 676 aaPredicted RBP13.31□□□□□ -0.28
PALB2-205ENST00000567003 ZIM3Q96PE6 472 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 ZNF275Q9NSD4 429 aaPredicted RBP13.31□□□□□ -0.28
PALB2-205ENST00000567003 LGALS13Q9UHV8 139 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 USP22Q9UPT9 525 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 RCE1Q9Y256 329 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 DSPPQ9NZW4 1301 aa13.31□□□□□ -0.28
PALB2-205ENST00000567003 LOC105371242A0A075B767 164 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 M0R082 166 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 M0R3G1 203 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 SYNGR3O43761 229 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 AVPP01185 164 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 BCHEP06276 602 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 GAAP10253 952 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 CD79AP11912 226 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 ETFAP13804 333 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 LBPP18428 481 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 EPHA1P21709 976 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 GTF2E2P29084 291 aaKnown RBP13.3□□□□□ -0.28
PALB2-205ENST00000567003 ANXA11P50995 505 aaKnown RBP13.3□□□□□ -0.28
PALB2-205ENST00000567003 ABCE1P61221 599 aaKnown RBP13.3□□□□□ -0.28
PALB2-205ENST00000567003 PIGFQ07326 219 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 ALKBH6Q3KRA9 238 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 FAHD2BQ6P2I3 314 aaPredicted RBP13.3□□□□□ -0.28
PALB2-205ENST00000567003 UGT2A3Q6UWM9 527 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 WDFY1Q8IWB7 410 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 LRRC34Q8IZ02 419 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 TMEM123Q8N131 208 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 TRIML2Q8N7C3 387 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 MFSD8Q8NHS3 518 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 ZNF417Q8TAU3 575 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 STK35Q8TDR2 534 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 ZMYND19Q96E35 227 aaPredicted RBP13.3□□□□□ -0.28
PALB2-205ENST00000567003 FAHD2AQ96GK7 314 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 OR2M2Q96R28 347 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 ZNF587Q96SQ5 575 aaPredicted RBP13.3□□□□□ -0.28
PALB2-205ENST00000567003 SORT1Q99523 831 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 RACGAP1Q9H0H5 632 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 MOV10Q9HCE1 1003 aaKnown RBP13.3□□□□□ -0.28
PALB2-205ENST00000567003 B3GNT2Q9NY97 397 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 PCDHB10Q9UN67 800 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 GRIP1Q9Y3R0 1128 aa13.3□□□□□ -0.28
PALB2-205ENST00000567003 PRKDCP78527 4128 aaKnown RBP13.29□□□□□ -0.28
PALB2-205ENST00000567003 PPIHO43447 177 aaKnown RBP13.29□□□□□ -0.28
PALB2-205ENST00000567003 TRAF3IP2O43734 574 aaPredicted RBP13.29□□□□□ -0.28
PALB2-205ENST00000567003 TYROBPO43914 113 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 MYZAPP0CAP1 466 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 NAT2P11245 290 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 MVDP53602 400 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 AQP5P55064 265 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 HILS1P60008 231 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 LMO4P61968 165 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 C1DQ13901 141 aaKnown RBP13.29□□□□□ -0.28
PALB2-205ENST00000567003 DPY19L1Q2PZI1 675 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 RNF220Q5VTB9 566 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 RIBC1Q8N443 379 aaPredicted RBP13.29□□□□□ -0.28
PALB2-205ENST00000567003 OR51F2Q8NH61 342 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 SGMS2Q8NHU3 365 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 FAM216AQ8WUB2 273 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 TAAR8Q969N4 342 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 OXGR1Q96P68 337 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 OR52E6Q96RD3 313 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 EMC6Q9BV81 110 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 P2RX2Q9UBL9 471 aa13.29□□□□□ -0.28
PALB2-205ENST00000567003 A0A096LPI6 279 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 ZNF99A8MXY4 864 aaPredicted RBP13.28□□□□□ -0.28
PALB2-205ENST00000567003 HPRP00739 348 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 TFP02787 698 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 SERPINE1P05121 402 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 HLA-DOBP13765 273 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 ZNF14P17017 642 aaPredicted RBP13.28□□□□□ -0.28
PALB2-205ENST00000567003 ACHEP22303 614 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 GRPRP30550 384 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 GTDC1Q4AE62 458 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 AVPI1Q5T686 147 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 ANKK1Q8NFD2 765 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 SLC38A5Q8WUX1 472 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 RDH5Q92781 318 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 TMEM19Q96HH6 336 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 ZNF75AQ96N20 296 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 SLC6A7Q99884 636 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 PNPOQ9NVS9 261 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 AIG1Q9NVV5 245 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 RAP2CQ9Y3L5 183 aa13.28□□□□□ -0.28
PALB2-205ENST00000567003 ARHGAP32A7KAX9 2087 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms