RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 SLC36A3Q495N2 470 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 SOWAHCQ53LP3 525 aaPredicted RBP6.95□□□□□ -1.3
CDH1-208ENST00000565810 EMC4Q5J8M3 183 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 CLEC12AQ5QGZ9 265 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 EEF1A1P5Q5VTE0 462 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 ANKRD34AQ69YU3 496 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 GPR139Q6DWJ6 353 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 SLC27A4Q6P1M0 643 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 RPTNQ6XPR3 784 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 HDDC2Q7Z4H3 204 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 ADGRE4PQ86SQ3 457 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 LSRQ86X29 649 aaPredicted RBP6.95□□□□□ -1.3
CDH1-208ENST00000565810 ZNF843Q8N446 348 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 GALNT11Q8NCW6 608 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 ZNF555Q8NEP9 628 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 OR9K2Q8NGE7 335 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 MOSPD2Q8NHP6 518 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 RNF128Q8TEB7 428 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 ZNF570Q96NI8 536 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 ZFP3Q96NJ6 502 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 POLDIP3Q9BY77 421 aaKnown RBP6.95□□□□□ -1.3
CDH1-208ENST00000565810 PRRG3Q9BZD7 231 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 EGLN3Q9H6Z9 239 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 RNF122Q9H9V4 155 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 MCCC2Q9HCC0 563 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 GP6Q9HCN6 339 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 FANCFQ9NPI8 374 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 PARPBPQ9NWS1 579 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 SMPD3Q9NY59 655 aaPredicted RBP6.95□□□□□ -1.3
CDH1-208ENST00000565810 TAS2R5Q9NYW4 299 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 CLCF1Q9UBD9 225 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 SEC14L4Q9UDX3 406 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 IL20RAQ9UHF4 553 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 TMEFF2Q9UIK5 374 aaPredicted RBP6.95□□□□□ -1.3
CDH1-208ENST00000565810 SH3BGRL2Q9UJC5 107 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 OSGIN2Q9Y236 505 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 SPTA1P02549 2419 aa6.95□□□□□ -1.3
CDH1-208ENST00000565810 A0A1B0GUH1 482 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 MBD3L4A6NDZ8 208 aaPredicted RBP6.94□□□□□ -1.3
CDH1-208ENST00000565810 MBD3L3A6NE82 208 aaPredicted RBP6.94□□□□□ -1.3
CDH1-208ENST00000565810 A6NIZ1 184 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 MBD3L5A6NJ08 208 aaPredicted RBP6.94□□□□□ -1.3
CDH1-208ENST00000565810 ZNF724A8MTY0 619 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 ZNF814B7Z6K7 855 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 E9PLN8 166 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 H0YJX3 145 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 XKRYO14609 159 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 IMPA2O14732 288 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 IDH3BO43837 385 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 MRPL33O75394 65 aaKnown RBP6.94□□□□□ -1.3
CDH1-208ENST00000565810 AQP8O94778 261 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 PRB1P04280 392 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 APEHP13798 732 aaKnown RBP6.94□□□□□ -1.3
CDH1-208ENST00000565810 IFNGR1P15260 489 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 TIMP3P35625 211 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 CA7P43166 264 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 GIPRP48546 466 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 HSPA13P48723 471 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 P2RY4P51582 365 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 SLC16A1P53985 500 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 RAP1BP61224 184 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 RPL27P61353 136 aaKnown RBP6.94□□□□□ -1.3
CDH1-208ENST00000565810 RAP1AP62834 184 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 ERVK-25P63136 954 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 MYBPC1Q00872 1141 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 TOP3AQ13472 1001 aaPredicted RBP6.94□□□□□ -1.3
CDH1-208ENST00000565810 GINS1Q14691 196 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 SLC17A1Q14916 467 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 TTC23Q5W5X9 447 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 FAM205BPQ63HN1 556 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 ABLIM2Q6H8Q1 611 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 CASP12Q6UXS9 341 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 THSD4Q6ZMP0 1018 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 CREB3L2Q70SY1 520 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 SLC35D2Q76EJ3 337 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 IGFN1Q86VF2 1251 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 KIF18BQ86Y91 864 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 DHRSXQ8N5I4 330 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 MBD3L2Q8NHZ7 208 aaPredicted RBP6.94□□□□□ -1.3
CDH1-208ENST00000565810 ABHD3Q8WU67 409 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 NRG4Q8WWG1 115 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 GMPPAQ96IJ6 420 aaPredicted RBP6.94□□□□□ -1.3
CDH1-208ENST00000565810 PLEKHA8Q96JA3 519 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 ADAD1Q96M93 576 aaKnown RBP6.94□□□□□ -1.3
CDH1-208ENST00000565810 ERMAPQ96PL5 475 aaPredicted RBP6.94□□□□□ -1.3
CDH1-208ENST00000565810 SLC38A2Q96QD8 506 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 GPX7Q96SL4 187 aaPredicted RBP6.94□□□□□ -1.3
CDH1-208ENST00000565810 VKORC1Q9BQB6 163 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 KATNB1Q9BVA0 655 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 GABARAPL3Q9BY60 117 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 TXNIPQ9H3M7 391 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 TOR3AQ9H497 397 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 B3GAT1Q9P2W7 334 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 GRHPRQ9UBQ7 328 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 REV1Q9UBZ9 1251 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 TINAGQ9UJW2 476 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 ZNF346Q9UL40 294 aaKnown RBP6.94□□□□□ -1.3
CDH1-208ENST00000565810 NOSIPQ9Y314 301 aaKnown RBP6.94□□□□□ -1.3
CDH1-208ENST00000565810 EMC9Q9Y3B6 208 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 IER3IP1Q9Y5U9 82 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms