RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 SIX1Q15475 284 aaPredicted RBP3.14□□□□□ -1.91
CHD9-212ENST00000564641 CARTPTQ16568 116 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 NRF1Q16656 503 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 ARMCX4Q5H9R4 360 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 PAGE2BQ5JRK9 111 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 LGSNQ5TDP6 509 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 ZNF600Q6ZNG1 722 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 PLEKHG7Q6ZR37 379 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 Q6ZVH6 145 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 HDDC2Q7Z4H3 204 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 COX8CQ7Z4L0 72 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 ADGRD2Q7Z7M1 963 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 SYVN1Q86TM6 617 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 CARM1Q86X55 608 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 BLIDQ8IZY5 108 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.14□□□□□ -1.91
CHD9-212ENST00000564641 LEMD2Q8NC56 503 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 ZBTB44Q8NCP5 570 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 TTLQ8NG68 377 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 OR9Q2Q8NGE9 314 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 OR5H6Q8NGV6 325 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 CDC26Q8NHZ8 85 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 PNPT1Q8TCS8 783 aaKnown RBP3.14□□□□□ -1.91
CHD9-212ENST00000564641 MRAPQ8TCY5 172 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 SLC2A14Q8TDB8 520 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 TBCKQ8TEA7 893 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 RAB2BQ8WUD1 216 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 KCTD4Q8WVF5 259 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 CIDECQ96AQ7 238 aaPredicted RBP3.14□□□□□ -1.91
CHD9-212ENST00000564641 ULK4Q96C45 1275 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 CCDC124Q96CT7 223 aaKnown RBP3.14□□□□□ -1.91
CHD9-212ENST00000564641 NSMCE2Q96MF7 247 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 SECISBP2Q96T21 854 aaKnown RBP3.14□□□□□ -1.91
CHD9-212ENST00000564641 SPAG8Q99932 426 aaPredicted RBP3.14□□□□□ -1.91
CHD9-212ENST00000564641 AGPAT1Q99943 283 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 ALKBH7Q9BT30 221 aaPredicted RBP3.14□□□□□ -1.91
CHD9-212ENST00000564641 TMEM121Q9BTD3 319 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 NFKBIZQ9BYH8 718 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 SLC39A8Q9C0K1 460 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 STRADBQ9C0K7 418 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 ATG10Q9H0Y0 220 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 RIMS4Q9H426 269 aaPredicted RBP3.14□□□□□ -1.91
CHD9-212ENST00000564641 POMKQ9H5K3 350 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 C5orf66Q9H5L9 145 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 CWH43Q9H720 699 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 MOB1AQ9H8S9 216 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 RNF121Q9H920 327 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 GPN2Q9H9Y4 310 aaPredicted RBP3.14□□□□□ -1.91
CHD9-212ENST00000564641 PARVAQ9NVD7 372 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 SLC17A7Q9P2U7 560 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 SPASTQ9UBP0 616 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 TEKT2Q9UIF3 430 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 RIMS3Q9UJD0 308 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 PILRBQ9UKJ0 227 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 CLCA3PQ9Y6N3 262 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 CLUHO75153 1309 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 ARID2Q68CP9 1835 aa3.14□□□□□ -1.91
CHD9-212ENST00000564641 MTCL1Q9Y4B5 1905 aaKnown RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 IGLV3-22A0A075B6J6 115 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 OR5K4A6NMS3 321 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 PDZK1P1A8MUH7 402 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 HIDE1A8MVS5 230 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 TMX2-CTNND1H3BSU7 103 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 M0R3G1 203 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 MSH4O15457 936 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 CFLARO15519 480 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 CLDN3O15551 220 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 TNFSF12O43508 249 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 GUCA1CO95843 209 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 CCNE2O96020 404 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 MT-ATP6P00846 226 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 PDGFBP01127 241 aaPredicted RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 IFNA14P01570 189 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 CALB1P05937 261 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 HEXBP07686 556 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 RALBP11234 206 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 DNAJB1P25685 340 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 IVDP26440 423 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 GIFP27352 417 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 YWHABP31946 246 aaKnown RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 DUTP33316 252 aaKnown RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 TRIM23P36406 574 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 HTR2BP41595 481 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 OR1G1P47890 313 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 CNN1P51911 297 aaKnown RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 EIF3EP60228 445 aaKnown RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 ABCE1P61221 599 aaKnown RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 SSTP61278 116 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 VBP1P61758 197 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 ZNF33BQ06732 778 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 BST1Q10588 318 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 PPP1R8Q12972 351 aaKnown RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 MRPL28Q13084 256 aaKnown RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 ART3Q13508 389 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 GK2Q14410 553 aaPredicted RBP3.13□□□□□ -1.91
CHD9-212ENST00000564641 CHI3L2Q15782 390 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 NEDD8Q15843 81 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 KYAT1Q16773 422 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 ZNF181Q2M3W8 571 aa3.13□□□□□ -1.91
CHD9-212ENST00000564641 DCAF4L1Q3SXM0 396 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms