RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 BBS4Q96RK4 519 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 SLC22A12Q96S37 553 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 MCHR1Q99705 422 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 NPAS1Q99742 590 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 SOX7Q9BT81 388 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 MRI1Q9BV20 369 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ZNF416Q9BWM5 594 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 GPR87Q9BY21 358 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 GSDMCQ9BYG8 508 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 CHIAQ9BZP6 476 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 PCBD2Q9H0N5 130 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 DPEP2Q9H4A9 486 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ZMAT4Q9H898 229 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 CACYBPQ9HB71 228 aaKnown RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 BEX1Q9HBH7 125 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 WASH6PQ9NQA3 447 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 SLC35C2Q9NQQ7 365 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 MRPL17Q9NRX2 175 aaKnown RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 TEX10Q9NXF1 929 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 TAS2R5Q9NYW4 299 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 SPG21Q9NZD8 308 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 PIPOXQ9P0Z9 390 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 NCDNQ9UBB6 729 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ATPIF1Q9UII2 106 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 CLEC4EQ9ULY5 219 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 GPR34Q9UPC5 381 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 CA5BQ9Y2D0 317 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 ZNF175Q9Y473 711 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 KLF2Q9Y5W3 355 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-212ENST00000564503 HEATR5AQ86XA9 2040 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 LRP4O75096 1905 aa4.33□□□□□ -1.72
CAPN3-212ENST00000564503 A0A0A6YYD5 115 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 ANKRD20A5PA0PJZ0 165 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 ZNF879B4DU55 563 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 NEDD8-MDP1E9PL57 170 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 H3BUI4 141 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 J3QLW9 94 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 DNASE2O00115 360 aaPredicted RBP4.32□□□□□ -1.72
CAPN3-212ENST00000564503 BHLHE40O14503 412 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 KIAA0355O15063 1070 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 TMPRSS11DO60235 418 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 GMDSO60547 372 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 RCBTB2O95199 551 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 TBX6O95947 436 aaPredicted RBP4.32□□□□□ -1.72
CAPN3-212ENST00000564503 HPP00738 406 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 EGFP01133 1207 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 RPN2P04844 631 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 HMGN2P05204 90 aaKnown RBP4.32□□□□□ -1.72
CAPN3-212ENST00000564503 PROS1P07225 676 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 RAB40ALP0C0E4 278 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 SBK2P0C263 348 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 UBBP0CG47 229 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 UBCP0CG48 685 aaKnown RBP4.32□□□□□ -1.72
CAPN3-212ENST00000564503 ERGP11308 486 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 ZNF19P17023 458 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 ACADLP28330 430 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 MAT2AP31153 395 aaKnown RBP4.32□□□□□ -1.72
CAPN3-212ENST00000564503 FAUP35544 74 aaKnown RBP4.32□□□□□ -1.72
CAPN3-212ENST00000564503 MNDAP41218 407 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 CBX5P45973 191 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 GDI2P50395 445 aaKnown RBP4.32□□□□□ -1.72
CAPN3-212ENST00000564503 DLX5P56178 289 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 GMFBP60983 142 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 SEC61A1P61619 476 aaKnown RBP4.32□□□□□ -1.72
CAPN3-212ENST00000564503 RPS27AP62979 156 aaKnown RBP4.32□□□□□ -1.72
CAPN3-212ENST00000564503 UBA52P62987 128 aaKnown RBP4.32□□□□□ -1.72
CAPN3-212ENST00000564503 S100A12P80511 92 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 SLC7A9P82251 487 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 E2F1Q01094 437 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 ZNF85Q03923 595 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 SCRN3Q0VDG4 424 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 ILF3Q12906 894 aaKnown RBP eCLIP4.32□□□□□ -1.72
CAPN3-212ENST00000564503 IL10RAQ13651 578 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 LASP1Q14847 261 aaKnown RBP4.32□□□□□ -1.72
CAPN3-212ENST00000564503 GPNMBQ14956 572 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 ARHGAP19Q14CB8 494 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 ZMYND11Q15326 602 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 GPR162Q16538 588 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 EIPR1Q53HC9 387 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 CCDC157Q569K6 752 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 FAM27D1Q5T7N8 215 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 FAM46CQ5VWP2 391 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 TXNDC8Q6A555 127 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 SFRP4Q6FHJ7 346 aaPredicted RBP4.32□□□□□ -1.72
CAPN3-212ENST00000564503 OR5M10Q6IEU7 315 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 OR4C11Q6IEV9 310 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 SLC25A25Q6KCM7 469 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 C17orf99Q6UX52 265 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 UNQ9370/PRO34162Q6UXP9 181 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 GSG1LQ6UXU4 331 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 APOOLQ6UXV4 268 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 OLIG3Q7RTU3 272 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 PRSS45Q7RTY3 260 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 TRMT11Q7Z4G4 463 aaKnown RBP4.32□□□□□ -1.72
CAPN3-212ENST00000564503 TMEM150AQ86TG1 271 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 VRK2Q86Y07 508 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 LDLRAD3Q86YD5 345 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 TRAPPC5Q8IUR0 188 aa4.32□□□□□ -1.72
CAPN3-212ENST00000564503 NKAIN4Q8IVV8 208 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms