RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	SMAD5	Q99717	465 aa	Known RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	LPAR3	Q9UBY5	353 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	LAMB1	P07942	1786 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	GRM7	Q14831	915 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	CTXN3	Q4LDR2	81 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	SLC35E3	Q7Z769	313 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	OR5H2	Q8NGV7	314 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	HUS1B	Q8NHY5	278 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	RPL10L	Q96L21	214 aa	Known RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	LRRC3B	Q96PB8	259 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	C2orf88	Q9BSF0	95 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	PLEKHA1	Q9HB21	404 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	MYOZ1	Q9NP98	299 aa	Predicted RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	RCC2	Q9P258	522 aa	Known RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	DNASE2	O00115	360 aa	Predicted RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	GBA	P04062	536 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	TK1	P04183	234 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	IL10RA	Q13651	578 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	ADIRF	Q15847	76 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	TECTB	Q96PL2	329 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	HSPB7	Q9UBY9	170 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	DCTN6	O00399	190 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	GPR32	O75388	356 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	FBXO24	O75426	580 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	BCKDHB	P21953	392 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	RPL34	P49207	117 aa	Known RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	RPS25	P62851	125 aa	Known RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	EGLN2	Q96KS0	407 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	RIF1	Q5UIP0	2472 aa	Known RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	TLE2	Q04725	743 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	DLK2	Q6UY11	383 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	GDPD4	Q6W3E5	623 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	WDR5B	Q86VZ2	330 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	NDRG1	Q92597	394 aa	Known RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	KHSRP	Q92945	711 aa	Known RBP eCLIP	3.95	□□□□□ -1.78	2e-6	■■□□□ 13
MACF1-231	ENST00000564288	HLA-C	Q95604	372 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	MRPS24	Q96EL2	167 aa	Known RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	NELFA	Q9H3P2	528 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	GAL3ST2	Q9H3Q3	398 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	KCTD3	Q9Y597	815 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	MYO9A	B2RTY4	2548 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	FTCDNL1	E5RQL4	147 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	FXYD1	O00168	92 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	PRR35	P0CG20	571 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	ATP1B2	P14415	290 aa	Predicted RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	ZNF44	P15621	663 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	CD80	P33681	288 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	DUSP28	Q4G0W2	176 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	SLC16A14	Q7RTX9	510 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	RXFP4	Q8TDU9	374 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	TFG	Q92734	400 aa	Predicted RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	C16orf58	Q96GQ5	468 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	UBR2	Q8IWV8	1755 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	TMX2-CTNND1	H3BSU7	103 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	SLC25A12	O75746	678 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	TMEM150A	Q86TG1	271 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	GLYATL1	Q969I3	302 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	ISG20	Q96AZ6	181 aa	Known RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	IGSF21	Q96ID5	467 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	HIST1H2AA	Q96QV6	131 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	COL25A1	Q9BXS0	654 aa	Predicted RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	RNF19A	Q9NV58	838 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	C1orf123	Q9NWV4	160 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	PIM2	Q9P1W9	311 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	TES	Q9UGI8	421 aa	Known RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	KCND3	Q9UK17	655 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	KCNMB2	Q9Y691	235 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	CBR1	P16152	277 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	BMP5	P22003	454 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	PKDCC	Q504Y2	493 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	TRIM61	Q5EBN2	209 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	MRPL52	Q86TS9	123 aa	Known RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	COMMD2	Q86X83	199 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	ATG4C	Q96DT6	458 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	RHCG	Q9UBD6	479 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	DDX60	Q8IY21	1712 aa	Known RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288		A6NIN4	97 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	TMEM212	A6NML5	194 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	FAM166B	A8MTA8	275 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	DBI	P07108	87 aa	Known RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	ADRB3	P13945	408 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	ZNF345	Q14585	488 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	BOLL	Q8N9W6	283 aa	Known RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	MYH14	Q7Z406	1995 aa	Known RBP	3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	TMEM150B	A6NC51	233 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	OR6C6	A6NF89	314 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	ANHX	E9PGG2	379 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	NXPE4	Q6UWF7	544 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	OR4F15	Q8NGB8	312 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	OR4K15	Q8NH41	348 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	PCED1A	Q9H1Q7	454 aa		3.95	□□□□□ -1.78
MACF1-231	ENST00000564288	HEPACAM2	A8MVW5	462 aa		3.94	□□□□□ -1.78
MACF1-231	ENST00000564288	RPLP1	P05386	114 aa	Known RBP	3.94	□□□□□ -1.78
MACF1-231	ENST00000564288	KLF3	P57682	345 aa	Predicted RBP	3.94	□□□□□ -1.78
MACF1-231	ENST00000564288	DND1	Q8IYX4	353 aa	Known RBP	3.94	□□□□□ -1.78
MACF1-231	ENST00000564288	SLC38A9	Q8NBW4	561 aa		3.94	□□□□□ -1.78
MACF1-231	ENST00000564288	FAM3D	Q96BQ1	224 aa		3.94	□□□□□ -1.78
MACF1-231	ENST00000564288	TLNRD1	Q9H1K6	362 aa		3.94	□□□□□ -1.78
MACF1-231	ENST00000564288	PADI1	Q9ULC6	663 aa		3.94	□□□□□ -1.78
MACF1-231	ENST00000564288	ZMIZ1	Q9ULJ6	1067 aa		3.94	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms