RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 VANGL1Q8TAA9 524 aaPredicted RBP15.42■□□□□ 0.06
NME3-205ENST00000563854 ANKRD27Q96NW4 1050 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 MCHR1Q99705 422 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 ZNF385DQ9H6B1 395 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 HIVEP2P31629 2446 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 A0A087WUJ7 227 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 CPSF4LA6NMK7 179 aaKnown RBP15.41■□□□□ 0.06
NME3-205ENST00000563854 LRRN3E7EW58 273 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 M0R3G1 203 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 TPST2O60704 377 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 CRYAAP02489 173 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 BMP4P12644 408 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 H2AFXP16104 143 aaPredicted RBP15.41■□□□□ 0.06
NME3-205ENST00000563854 CDH12P55289 794 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 SH3BGRP55822 239 aaPredicted RBP15.41■□□□□ 0.06
NME3-205ENST00000563854 POU3F1Q03052 451 aaPredicted RBP15.41■□□□□ 0.06
NME3-205ENST00000563854 RBBP4Q09028 425 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 PMS2P3Q13401 168 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 CEACAM16Q2WEN9 425 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 NET1Q7Z628 596 aaPredicted RBP15.41■□□□□ 0.06
NME3-205ENST00000563854 PIK3C3Q8NEB9 887 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 STON2Q8WXE9 905 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 OR2M2Q96R28 347 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 EMC6Q9BV81 110 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 NELFAQ9H3P2 528 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 SEC61A2Q9H9S3 476 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 CRLF2Q9HC73 371 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 GPR35Q9HC97 309 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 PMF1-BGLAPU3KQ54 211 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 ABCA2Q9BZC7 2435 aa15.41■□□□□ 0.06
NME3-205ENST00000563854 CSPG4Q6UVK1 2322 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 CR1P17927 2039 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 ARPC4-TTLL3A0A0A6YYG9 625 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 H7C417 338 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 M0QX08 132 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 TRAF3IP2O43734 574 aaPredicted RBP15.4■□□□□ 0.06
NME3-205ENST00000563854 LY6HO94772 140 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 ZNF432O94892 652 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 HPRP00739 348 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 BGLAPP02818 100 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 CECR9P0C854 216 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 HLA-DOBP13765 273 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 PCBP3P57721 371 aaKnown RBP15.4■□□□□ 0.06
NME3-205ENST00000563854 NPRL3Q12980 569 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 MFSD13AQ14CX5 517 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 C1QTNF12Q5T7M4 302 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 DNM1P46Q6ZS02 220 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 PRIMA1Q86XR5 153 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 DPP10Q8N608 796 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 SLC26A7Q8TE54 656 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 MOGAT1Q96PD6 335 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 ARHGDIGQ99819 225 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 KATNB1Q9BVA0 655 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 TMEM120AQ9BXJ8 343 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 YAE1D1Q9NRH1 226 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 MED29Q9NX70 200 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 CORINQ9Y5Q5 1042 aa15.4■□□□□ 0.06
NME3-205ENST00000563854 PLCE1Q9P212 2302 aa15.39■□□□□ 0.05
NME3-205ENST00000563854 SASH3O75995 380 aa15.39■□□□□ 0.05
NME3-205ENST00000563854 AHCYP23526 432 aa15.39■□□□□ 0.05
NME3-205ENST00000563854 IDH3GP51553 393 aaPredicted RBP15.39■□□□□ 0.05
NME3-205ENST00000563854 SNRPD2P62316 118 aaKnown RBP15.39■□□□□ 0.05
NME3-205ENST00000563854 NAAAQ02083 359 aa15.39■□□□□ 0.05
NME3-205ENST00000563854 DUSP7Q16829 419 aa15.39■□□□□ 0.05
NME3-205ENST00000563854 TMEM123Q8N131 208 aa15.39■□□□□ 0.05
NME3-205ENST00000563854 ADPRHL1Q8NDY3 354 aa15.39■□□□□ 0.05
NME3-205ENST00000563854 GPR32P1Q8NGA4 272 aa15.39■□□□□ 0.05
NME3-205ENST00000563854 OR6T1Q8NGN1 323 aa15.39■□□□□ 0.05
NME3-205ENST00000563854 OR10A6Q8NH74 314 aa15.39■□□□□ 0.05
NME3-205ENST00000563854 MAGEE2Q8TD90 523 aaPredicted RBP15.39■□□□□ 0.05
NME3-205ENST00000563854 ZNF837Q96EG3 531 aaPredicted RBP15.39■□□□□ 0.05
NME3-205ENST00000563854 BOD1Q96IK1 185 aa15.39■□□□□ 0.05
NME3-205ENST00000563854 SIKE1Q9BRV8 207 aa15.39■□□□□ 0.05
NME3-205ENST00000563854 HEATR1Q9H583 2144 aaKnown RBP15.38■□□□□ 0.05
NME3-205ENST00000563854 C11orf98E9PRG8 122 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 MS4A18H0YCH9 400 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 RPL36A-HNRNPH2H7BZ11 118 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 KPNA4O00629 521 aaPredicted RBP15.38■□□□□ 0.05
NME3-205ENST00000563854 FZD7O75084 574 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 CELA3BP08861 270 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 PCGF2P35227 344 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 DSCR9P59020 149 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 PUDPQ08623 228 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 NPTX1Q15818 432 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 MS4A18Q3C1V0 323 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 ENTPD8Q5MY95 495 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 PHYHD1Q5SRE7 291 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 SWT1Q5T5J6 900 aaKnown RBP15.38■□□□□ 0.05
NME3-205ENST00000563854 ZNF613Q6PF04 617 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 SLC46A3Q7Z3Q1 461 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 MYPOPQ86VE0 399 aaPredicted RBP15.38■□□□□ 0.05
NME3-205ENST00000563854 RBM45Q8IUH3 476 aaKnown RBP15.38■□□□□ 0.05
NME3-205ENST00000563854 SCAIQ8N9R8 606 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 OR6S1Q8NH40 331 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 FAM168AQ92567 244 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 ZNF317Q96PQ6 595 aaPredicted RBP15.38■□□□□ 0.05
NME3-205ENST00000563854 TMEM43Q9BTV4 400 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 KAT8Q9H7Z6 458 aaKnown RBP15.38■□□□□ 0.05
NME3-205ENST00000563854 EVA1AQ9H8M9 152 aa15.38■□□□□ 0.05
NME3-205ENST00000563854 CA10Q9NS85 328 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms