RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 RPS5P46782 204 aaKnown RBP13.87□□□□□ -0.19
USB1-208ENST00000563207 YAP1P46937 504 aaKnown RBP13.87□□□□□ -0.19
USB1-208ENST00000563207 PCYT1AP49585 367 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 OR7A5Q15622 319 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 ACKR1Q16570 336 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 WDR88Q6ZMY6 472 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 NUFIP2Q7Z417 695 aaKnown RBP13.87□□□□□ -0.19
USB1-208ENST00000563207 TSEN54Q7Z6J9 526 aaKnown RBP13.87□□□□□ -0.19
USB1-208ENST00000563207 ZDHHC21Q8IVQ6 265 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 NKAIN4Q8IVV8 208 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 SCAIQ8N9R8 606 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 OR6K3Q8NGY3 331 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 ABHD3Q8WU67 409 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 TAAR8Q969N4 342 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 DHRS1Q96LJ7 313 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 SEPHS2Q99611 448 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 PIP5K1AQ99755 562 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 SF3B5Q9BWJ5 86 aaKnown RBP13.87□□□□□ -0.19
USB1-208ENST00000563207 YY1AP1Q9H869 796 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 BCO1Q9HAY6 547 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 B3GALT5Q9Y2C3 310 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 MED31Q9Y3C7 131 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 FREM1Q5H8C1 2179 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 IGKV3D-15A0A087WSY6 115 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 IGHV3-15A0A0B4J1V0 119 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 TCRBV3S1A0A5B6 114 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 DHRS12A0PJE2 317 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 ZNF724A8MTY0 619 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 hCG_2039718K7EN88 272 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 GPR171O14626 319 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 KRT36O76013 467 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 YES1P07947 543 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 AGTR1P30556 359 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 SLC16A1P53985 500 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 CTBP2P56545 445 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 RASGEF1BQ0VAM2 473 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 Q5PR19 223 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 ABLIM2Q6H8Q1 611 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 ALKBH2Q6NS38 261 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 RRM2BQ7LG56 351 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 SPATA24Q86W54 205 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 ADPRHL1Q8NDY3 354 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 ACOT11Q8WXI4 607 aaPredicted RBP13.86□□□□□ -0.19
USB1-208ENST00000563207 PERPQ96FX8 193 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 C18orf12Q96KH6 178 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 FKRPQ9H9S5 495 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 MAN2C1Q9NTJ4 1040 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 EMC3Q9P0I2 261 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 RASD1Q9Y272 281 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 EMC9Q9Y3B6 208 aa13.86□□□□□ -0.19
USB1-208ENST00000563207 LOC102725191A0A1B0GVB3 256 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.85□□□□□ -0.19
USB1-208ENST00000563207 AQP7P3A6NL99 342 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 BGLAPP02818 100 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 FOSL1P15407 271 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 EDNRAP25101 427 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 GK3PQ14409 553 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 TMEM201Q5SNT2 666 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 OTUD3Q5T2D3 398 aaPredicted RBP13.85□□□□□ -0.19
USB1-208ENST00000563207 C1orf146Q5VVC0 180 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 TMEM225Q6GV28 225 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 H1FNTQ75WM6 255 aaPredicted RBP13.85□□□□□ -0.19
USB1-208ENST00000563207 TUSC5Q8IXB3 177 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 ADGRG5Q8IZF4 528 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 CDK20Q8IZL9 346 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 TMEM255BQ8WV15 326 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 LIPHQ8WWY8 451 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 SLC25A36Q96CQ1 311 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 RAB3IPQ96QF0 476 aaPredicted RBP13.85□□□□□ -0.19
USB1-208ENST00000563207 PSD2Q9BQI7 771 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 ASPNQ9BXN1 380 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 MEPEQ9NQ76 525 aaPredicted RBP13.85□□□□□ -0.19
USB1-208ENST00000563207 NANSQ9NR45 359 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 MRPL39Q9NYK5 338 aaKnown RBP13.85□□□□□ -0.19
USB1-208ENST00000563207 KLHL13Q9P2N7 655 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 RHCGQ9UBD6 479 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 ZNF229Q9UJW7 825 aa13.85□□□□□ -0.19
USB1-208ENST00000563207 TRIM64A6NGJ6 449 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 TRIM64BA6NI03 449 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 SMPD2O60906 423 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 AKR7A3O95154 331 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 GADD45GO95257 159 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 HIST1H2ABP04908 130 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 INHBBP09529 407 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 GRPRP30550 384 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 HMGA2P52926 109 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 LTBQ06643 244 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 ZNF74Q16587 644 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 ZNF730Q6ZMV8 503 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 MBOAT2Q6ZWT7 520 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 HIST3H2AQ7L7L0 130 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 WFDC8Q8IUA0 241 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 P3H2Q8IVL5 708 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 C10orf67Q8IYJ2 551 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 LINC00471Q8N535 108 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 C10orf53Q8N6V4 93 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 TMEM99Q8N816 258 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 SLC7A13Q8TCU3 470 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 CANT1Q8WVQ1 401 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 HIST1H2ACQ93077 130 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms