RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 A4GALTQ9NPC4 353 aa10.1□□□□□ -0.79
USP3-220ENST00000561381 TMEM160Q9NX00 188 aa10.1□□□□□ -0.79
USP3-220ENST00000561381 SLC25A37Q9NYZ2 338 aa10.1□□□□□ -0.79
USP3-220ENST00000561381 PRDM4Q9UKN5 801 aa10.1□□□□□ -0.79
USP3-220ENST00000561381 FKBP7Q9Y680 259 aa10.1□□□□□ -0.79
USP3-220ENST00000561381 A0A1B0GWA3 101 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 TMEM247A6NEH6 219 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 OR6C65A6NJZ3 312 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 M0R082 166 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 TPST1O60507 370 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 SEC14L2O76054 403 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 IGKV3-15P01624 115 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 BMP2P12643 396 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 ZNF43P17038 809 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 GZMKP49863 264 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 IDH3GP51553 393 aaPredicted RBP10.09□□□□□ -0.79
USP3-220ENST00000561381 KRTAP24-1Q3LI83 254 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 GLIPR1L2Q4G1C9 344 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 PHYHD1Q5SRE7 291 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 C6orf89Q6UWU4 347 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 CROCCP2Q86T23 111 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 ZCCHC24Q8N2G6 241 aaKnown RBP10.09□□□□□ -0.79
USP3-220ENST00000561381 NFKBIDQ8NI38 313 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 BBS10Q8TAM1 723 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 ZNF417Q8TAU3 575 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 MAGEE2Q8TD90 523 aaPredicted RBP10.09□□□□□ -0.79
USP3-220ENST00000561381 MSI2Q96DH6 328 aaKnown RBP10.09□□□□□ -0.79
USP3-220ENST00000561381 OXGR1Q96P68 337 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 ZNF587Q96SQ5 575 aaPredicted RBP10.09□□□□□ -0.79
USP3-220ENST00000561381 PIMREGQ9BSJ6 248 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 SOX7Q9BT81 388 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 SHARPINQ9H0F6 387 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 PLK3Q9H4B4 646 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 GPR35Q9HC97 309 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 THUMPD1Q9NXG2 353 aaKnown RBP10.09□□□□□ -0.79
USP3-220ENST00000561381 NKIRAS1Q9NYS0 192 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 SLAMF8Q9P0V8 285 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 RCE1Q9Y256 329 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 USH1CQ9Y6N9 552 aa10.09□□□□□ -0.79
USP3-220ENST00000561381 LOC100289279A0A1B0GTE1 492 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 B9A039 149 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 RPL36A-HNRNPH2H7BZ11 118 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 FZD7O75084 574 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 SLC43A1O75387 559 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 HLA-DOBP13765 273 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 APEHP13798 732 aaKnown RBP10.08□□□□□ -0.8
USP3-220ENST00000561381 CBR1P16152 277 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 GTF2E2P29084 291 aaKnown RBP10.08□□□□□ -0.8
USP3-220ENST00000561381 GRPRP30550 384 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 THBS4P35443 961 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 SLC18A1P54219 525 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 SH3BGRP55822 239 aaPredicted RBP10.08□□□□□ -0.8
USP3-220ENST00000561381 NPRL3Q12980 569 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 FADDQ13158 208 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 C1DQ13901 141 aaKnown RBP10.08□□□□□ -0.8
USP3-220ENST00000561381 EFNB3Q15768 340 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 CEACAM16Q2WEN9 425 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 C3orf36Q3SXR2 165 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 IQCCQ4KMZ1 466 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 CARD17Q5XLA6 110 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 EPGNQ6UW88 154 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 FUNDC1Q8IVP5 155 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 WDFY1Q8IWB7 410 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 SLC35B4Q969S0 331 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 TLCD1Q96CP7 247 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 ZNF317Q96PQ6 595 aaPredicted RBP10.08□□□□□ -0.8
USP3-220ENST00000561381 OR2M2Q96R28 347 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 WFDC6Q9BQY6 131 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 BPESC1Q9GZL8 116 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 CRLF2Q9HC73 371 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 RPS6KB2Q9UBS0 482 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 LPAR3Q9UBY5 353 aa10.08□□□□□ -0.8
USP3-220ENST00000561381 IGHV2OR16-5A0A0B4J2B6 119 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 LOC390937A0A1W2PQ73 354 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 TMEM129A0AVI4 362 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 SH3PXD2BA1X283 911 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 LRP5LA4QPB2 252 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 C5orf58C9J3I9 102 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 MS4A18H0YCH9 400 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 hCG_2039718K7EN88 272 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 M0R3G1 203 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 NDUFS8O00217 210 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 AIM2O14862 343 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 TRAF3IP2O43734 574 aaPredicted RBP10.07□□□□□ -0.8
USP3-220ENST00000561381 PDE5AO76074 875 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 HPRP00739 348 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 IGFBP1P08833 259 aaPredicted RBP10.07□□□□□ -0.8
USP3-220ENST00000561381 ARAFP10398 606 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 ETS2P15036 469 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 LORP23490 312 aaPredicted RBP10.07□□□□□ -0.8
USP3-220ENST00000561381 PRKAR1BP31321 381 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 PPOXP50336 477 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 IL1RL1Q01638 556 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 MS4A18Q3C1V0 323 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 ALG10BQ5I7T1 473 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 PAGE3Q5JUK9 113 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 FAM120AOSQ5T036 256 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 GCNT6Q5T4J0 391 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 FAM69AQ5T7M9 428 aa10.07□□□□□ -0.8
USP3-220ENST00000561381 FAM166AQ6J272 317 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms