RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 SEC61A2Q9H9S3 476 aa6.47□□□□□ -1.37
ZEB1-223ENST00000561304 SLC17A5Q9NRA2 495 aa6.47□□□□□ -1.37
ZEB1-223ENST00000561304 INTS9Q9NV88 658 aaKnown RBP6.47□□□□□ -1.37
ZEB1-223ENST00000561304 THUMPD1Q9NXG2 353 aaKnown RBP6.47□□□□□ -1.37
ZEB1-223ENST00000561304 UPB1Q9UBR1 384 aa6.47□□□□□ -1.37
ZEB1-223ENST00000561304 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.47□□□□□ -1.37
ZEB1-223ENST00000561304 IFT52Q9Y366 437 aa6.47□□□□□ -1.37
ZEB1-223ENST00000561304 GMEB1Q9Y692 573 aa6.47□□□□□ -1.37
ZEB1-223ENST00000561304 MALRD1Q5VYJ5 2156 aa6.47□□□□□ -1.37
ZEB1-223ENST00000561304 SONP18583 2426 aaKnown RBP6.46□□□□□ -1.37
ZEB1-223ENST00000561304 A0A096LNT2 108 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 TMEM247A6NEH6 219 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 ZNF503-AS2A6NEH8 195 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 HMGB1P1B2RPK0 211 aaPredicted RBP6.46□□□□□ -1.37
ZEB1-223ENST00000561304 INAFM1C9JVW0 142 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 ATP6V1G2-DDX39BF2Z307 99 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 TMCC2O75069 709 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 AHSA1O95433 338 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 HPRP00739 348 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 OPN1SWP03999 348 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 CBLP22681 906 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 MPGP29372 298 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 PCBP3P57721 371 aaKnown RBP6.46□□□□□ -1.37
ZEB1-223ENST00000561304 TUBA1BP68363 451 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 TUBA4AP68366 448 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 SCARB2Q14108 478 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 NPTX1Q15818 432 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 RUNDC3AQ59EK9 446 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 PHYHD1Q5SRE7 291 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 OR7E24Q6IFN5 339 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 REEP3Q6NUK4 255 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 NIPAL3Q6P499 406 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 DHRS4L2Q6PKH6 230 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 SLC22A25Q6T423 547 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 TMEM108Q6UXF1 575 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 TUBA1AQ71U36 451 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 DHDDSQ86SQ9 333 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 TSPYL5Q86VY4 417 aaPredicted RBP6.46□□□□□ -1.37
ZEB1-223ENST00000561304 PRIMA1Q86XR5 153 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 SMYD1Q8NB12 490 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 C1orf162Q8NEQ5 155 aaPredicted RBP6.46□□□□□ -1.37
ZEB1-223ENST00000561304 GPR32P1Q8NGA4 272 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 OR4D11Q8NGI4 311 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 OR1K1Q8NGR3 316 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 MFSD8Q8NHS3 518 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 STK35Q8TDR2 534 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 SLC25A36Q96CQ1 311 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 MAGEB18Q96M61 343 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 TAPBPLQ9BX59 468 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 CACNG6Q9BXT2 260 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 TMEM38AQ9H6F2 299 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 KLHL14Q9P2G3 628 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 B3GALT5Q9Y2C3 310 aa6.46□□□□□ -1.37
ZEB1-223ENST00000561304 A0A0B4J2E0 115 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 IGHV1-18A0A0C4DH31 117 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 A0A1B0GX12 115 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 LRRN3E7EW58 273 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 M0R3H8 397 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 FBP2O00757 339 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 TRAF3IP2O43734 574 aaPredicted RBP6.45□□□□□ -1.38
ZEB1-223ENST00000561304 EDF1O60869 148 aaKnown RBP6.45□□□□□ -1.38
ZEB1-223ENST00000561304 LY6HO94772 140 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 ZNF432O94892 652 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 MFN2O95140 757 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 BGLAPP02818 100 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 THY1P04216 161 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 CELA3BP08861 270 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 HLA-DOBP13765 273 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 PTAFRP25105 342 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 GRPRP30550 384 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 TTKP33981 857 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 CRYBA2P53672 197 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 CLDN17P56750 224 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 RGS8P57771 180 aaPredicted RBP6.45□□□□□ -1.38
ZEB1-223ENST00000561304 SF3A3Q12874 501 aaKnown RBP eCLIP6.45□□□□□ -1.38
ZEB1-223ENST00000561304 ZSWIM7Q19AV6 140 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 TBRG1Q3YBR2 411 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 ALG10BQ5I7T1 473 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 TMEM225Q6GV28 225 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 CGB2Q6NT52 195 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 KLHL17Q6TDP4 642 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 WDR88Q6ZMY6 472 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 HDXQ7Z353 690 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 C17orf78Q8N4C9 275 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 DPP10Q8N608 796 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 LSMEM1Q8N8F7 131 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 POMGNT2Q8NAT1 580 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 STON2Q8WXE9 905 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 SLC35B4Q969S0 331 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 ANKRD27Q96NW4 1050 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 MOGAT1Q96PD6 335 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 DHRS9Q9BPW9 319 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 VIPAS39Q9H9C1 493 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 C12orf10Q9HB07 376 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 CACYBPQ9HB71 228 aaKnown RBP6.45□□□□□ -1.38
ZEB1-223ENST00000561304 PARPBPQ9NWS1 579 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 TESQ9UGI8 421 aaKnown RBP6.45□□□□□ -1.38
ZEB1-223ENST00000561304 POU2F3Q9UKI9 436 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 ADAM21Q9UKJ8 722 aa6.45□□□□□ -1.38
ZEB1-223ENST00000561304 USP22Q9UPT9 525 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms