RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 IKZF5Q9H5V7 419 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 GPR35Q9HC97 309 aa14.1□□□□□ -0.15
SNX1-213ENST00000561026 IGKV3-15P01624 115 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 USF1P22415 310 aaPredicted RBP14.09□□□□□ -0.15
SNX1-213ENST00000561026 SLC6A2P23975 617 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 GRPRP30550 384 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 AQP5P55064 265 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 ADIPOQQ15848 244 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 ADRM1Q16186 407 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 FAM91A1Q658Y4 838 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 ZNF837Q96EG3 531 aaPredicted RBP14.09□□□□□ -0.15
SNX1-213ENST00000561026 SORCS2Q96PQ0 1159 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 TMEM38AQ9H6F2 299 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 CRLF2Q9HC73 371 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 KLHL14Q9P2G3 628 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 CORO2BQ9UQ03 480 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 A0A087WUJ7 227 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 PRORSD1PA6NEY8 169 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 VWC2LB2RUY7 222 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 B9A039 149 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 PDE5AO76074 875 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 OR4A8P0C604 315 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 CBR1P16152 277 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 CALCRP30988 508 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 SCARB2Q14108 478 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 MFSD13AQ14CX5 517 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 EFNB3Q15768 340 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 CEACAM16Q2WEN9 425 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 AGKQ53H12 422 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 CYB5R2Q6BCY4 276 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 TMEM123Q8N131 208 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 GPR137CQ8N3F9 429 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 ADPRHL1Q8NDY3 354 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 PIK3C3Q8NEB9 887 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 OR4F15Q8NGB8 312 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 OR6S1Q8NH40 331 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 SLC47A1Q96FL8 570 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 SLC41A3Q96GZ6 507 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 OR2M2Q96R28 347 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 ZNF607Q96SK3 696 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 PLK3Q9H4B4 646 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 SEC61A2Q9H9S3 476 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 TMEM27Q9HBJ8 222 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 TESQ9UGI8 421 aaKnown RBP14.09□□□□□ -0.15
SNX1-213ENST00000561026 CDC42EP3Q9UKI2 254 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 FKBP7Q9Y680 259 aa14.09□□□□□ -0.15
SNX1-213ENST00000561026 YLPM1P49750 1951 aaKnown RBP14.08□□□□□ -0.16
SNX1-213ENST00000561026 FBN3Q75N90 2809 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 SVEP1Q4LDE5 3571 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 A0A0B4J2E0 115 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 A0A1B0GX12 115 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 EVPLLA8MZ36 301 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 MS4A18H0YCH9 400 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 NDUFS8O00217 210 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 TRAF3IP2O43734 574 aaPredicted RBP14.08□□□□□ -0.16
SNX1-213ENST00000561026 TPST2O60704 377 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 SERPINB7O75635 380 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 IGHV4-31P0DP07 118 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 CBLP22681 906 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 PDLIM4P50479 330 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 ATP4BP51164 291 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 NCALDP61601 193 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 LSM11P83369 360 aaKnown RBP eCLIP14.08□□□□□ -0.16
SNX1-213ENST00000561026 IL1RL1Q01638 556 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 HGFACQ04756 655 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 OR1Q1Q15612 314 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 MS4A18Q3C1V0 323 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 VHLLQ6RSH7 139 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 DLEU7Q6UYE1 221 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 SLC46A3Q7Z3Q1 461 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 CCDC36Q8IYA8 594 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 NUP37Q8NFH4 326 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 BHLHE22Q8NFJ8 381 aaPredicted RBP14.08□□□□□ -0.16
SNX1-213ENST00000561026 KCNK17Q96T54 332 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 EPYCQ99645 322 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 VRK1Q99986 396 aaPredicted RBP14.08□□□□□ -0.16
SNX1-213ENST00000561026 WFDC6Q9BQY6 131 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 TMEM160Q9NX00 188 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 SELENONQ9NZV5 590 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.08□□□□□ -0.16
SNX1-213ENST00000561026 CORINQ9Y5Q5 1042 aa14.08□□□□□ -0.16
SNX1-213ENST00000561026 ZNF503-AS2A6NEH8 195 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 ZNF99A8MXY4 864 aaPredicted RBP14.07□□□□□ -0.16
SNX1-213ENST00000561026 AKAP8O43823 692 aaKnown RBP14.07□□□□□ -0.16
SNX1-213ENST00000561026 HPRP00739 348 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 CELA3BP08861 270 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 FAM157CP0CG43 387 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 HLA-DOBP13765 273 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 NQO1P15559 274 aaKnown RBP14.07□□□□□ -0.16
SNX1-213ENST00000561026 AQP1P29972 269 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 ARR3P36575 388 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 NR4A2P43354 598 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 RGS8P57771 180 aaPredicted RBP14.07□□□□□ -0.16
SNX1-213ENST00000561026 SQLEQ14534 574 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 MYPOPQ86VE0 399 aaPredicted RBP14.07□□□□□ -0.16
SNX1-213ENST00000561026 ARMC8Q8IUR7 673 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 UEVLDQ8IX04 471 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 ANKS4BQ8N8V4 417 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 SCAIQ8N9R8 606 aa14.07□□□□□ -0.16
SNX1-213ENST00000561026 HIPK4Q8NE63 616 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms