RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 STEAP2Q8NFT2 490 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 LRRK1Q38SD2 2015 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 OBSL1O75147 1896 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 A0A1B0GTH9 108 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 SLC6A6P31641 620 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 PRMT2P55345 433 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 PRDX1Q06830 199 aaKnown RBP15.1■□□□□ 0.01
TPM1-228ENST00000560975 PON3Q15166 354 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 TMEM35AQ53FP2 167 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 NDUFAF7Q7L592 441 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 IFNL1Q8IU54 200 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 CCDC36Q8IYA8 594 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 C12orf45Q8N5I9 185 aaPredicted RBP15.1■□□□□ 0.01
TPM1-228ENST00000560975 OR6N1Q8NGY5 312 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 OR14A16Q8NHC5 309 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 THAP6Q8TBB0 222 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 ZPLD1Q8TCW7 415 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 NMNAT3Q96T66 252 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 CRB3Q9BUF7 120 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 GPR34Q9UPC5 381 aa15.1■□□□□ 0.01
TPM1-228ENST00000560975 SNRNP200O75643 2136 aaKnown RBP15.1■□□□□ 0.01
TPM1-228ENST00000560975 TRAV18A0A075B6X5 111 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 TRAV20A0A0B4J274 112 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 OR5H14A6NHG9 310 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 TMEM200CA6NKL6 621 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 KCNAB3O43448 404 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 GPRIN2O60269 458 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 CALCBP10092 127 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 BLOC1S1P78537 153 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 ILF3Q12906 894 aaKnown RBP eCLIP15.09■□□□□ 0.01
TPM1-228ENST00000560975 DUSP8Q13202 625 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 ARHGAP11AQ6P4F7 1023 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 CAMKVQ8NCB2 501 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 OR2A1Q8NGT9 310 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 Q96M85 177 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 PDCD10Q9BUL8 212 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 SLITRK2Q9H156 845 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 PIGMQ9H3S5 423 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 TMEM231Q9H6L2 316 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.09■□□□□ 0.01
TPM1-228ENST00000560975 A0A0D9SG52 128 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 ANXA2P07355 339 aaKnown RBP15.09■□□□□ 0.01
TPM1-228ENST00000560975 RFC3P40938 356 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 ZNF157P51786 506 aaPredicted RBP15.09■□□□□ 0.01
TPM1-228ENST00000560975 ST8SIA6P61647 398 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 SNRPNP63162 240 aaKnown RBP15.09■□□□□ 0.01
TPM1-228ENST00000560975 SRSF3P84103 164 aaKnown RBP15.09■□□□□ 0.01
TPM1-228ENST00000560975 UNQ6126/PRO20091Q6UXV3 157 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 SLC16A13Q7RTY0 426 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 LURAP1LQ8IV03 231 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 OR1M1Q8NGA1 313 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 PTDSS2Q9BVG9 487 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 APOBEC3BQ9UH17 382 aaKnown RBP15.09■□□□□ 0.01
TPM1-228ENST00000560975 XIRP2A4UGR9 3374 aa15.09■□□□□ 0.01
TPM1-228ENST00000560975 CRYBA1P05813 215 aa15.08■□□□□ 0.01
TPM1-228ENST00000560975 NGFRP08138 427 aa15.08■□□□□ 0.01
TPM1-228ENST00000560975 FBXO45P0C2W1 286 aa15.08■□□□□ 0.01
TPM1-228ENST00000560975 SLC35G4P0C7Q5 338 aa15.08■□□□□ 0.01
TPM1-228ENST00000560975 OR8G3PP0DMU2 310 aa15.08■□□□□ 0.01
TPM1-228ENST00000560975 NTHL1P78549 312 aa15.08■□□□□ 0.01
TPM1-228ENST00000560975 HTRA4P83105 476 aaPredicted RBP15.08■□□□□ 0.01
TPM1-228ENST00000560975 SNTB1Q13884 538 aaKnown RBP15.08■□□□□ 0.01
TPM1-228ENST00000560975 MPPED2Q15777 294 aa15.08■□□□□ 0.01
TPM1-228ENST00000560975 ARHGAP11BQ3KRB8 267 aa15.08■□□□□ 0.01
TPM1-228ENST00000560975 TRMT12Q53H54 448 aaKnown RBP15.08■□□□□ 0.01
TPM1-228ENST00000560975 TMEM71Q6P5X7 295 aa15.08■□□□□ 0.01
TPM1-228ENST00000560975 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.08■□□□□ 0.01
TPM1-228ENST00000560975 OR2L5Q8NG80 312 aa15.08■□□□□ 0.01
TPM1-228ENST00000560975 CXorf40AQ8TE69 158 aa15.08■□□□□ 0.01
TPM1-228ENST00000560975 SFT2D1Q8WV19 159 aa15.08■□□□□ 0.01
TPM1-228ENST00000560975 LGR4Q9BXB1 951 aa15.08■□□□□ 0.01
TPM1-228ENST00000560975 HCFC1R1Q9NWW0 138 aa15.08■□□□□ 0.01
TPM1-228ENST00000560975 KLF15Q9UIH9 416 aa15.08■□□□□ 0.01
TPM1-228ENST00000560975 OR14I1A6ND48 311 aa15.08■□□□□ 0
TPM1-228ENST00000560975 OR6C76A6NM76 312 aa15.08■□□□□ 0
TPM1-228ENST00000560975 MCIDASD6RGH6 385 aa15.08■□□□□ 0
TPM1-228ENST00000560975 EIF3GO75821 320 aaKnown RBP eCLIP15.08■□□□□ 0
TPM1-228ENST00000560975 LRG1P02750 347 aa15.08■□□□□ 0
TPM1-228ENST00000560975 CSF1P09603 554 aa15.08■□□□□ 0
TPM1-228ENST00000560975 OR4E1P0C645 316 aa15.08■□□□□ 0
TPM1-228ENST00000560975 AKAIN1P0CW23 69 aa15.08■□□□□ 0
TPM1-228ENST00000560975 CST5P28325 142 aaPredicted RBP15.08■□□□□ 0
TPM1-228ENST00000560975 RPL4P36578 427 aaKnown RBP15.08■□□□□ 0
TPM1-228ENST00000560975 ZIC1Q15915 447 aa15.08■□□□□ 0
TPM1-228ENST00000560975 OR51D1Q8NGF3 324 aa15.08■□□□□ 0
TPM1-228ENST00000560975 ARRDC3Q96B67 414 aa15.08■□□□□ 0
TPM1-228ENST00000560975 TRPV4Q9HBA0 871 aa15.08■□□□□ 0
TPM1-228ENST00000560975 MRPS30Q9NP92 439 aaKnown RBP15.08■□□□□ 0
TPM1-228ENST00000560975 ICAM5Q9UMF0 924 aa15.08■□□□□ 0
TPM1-228ENST00000560975 WNT6Q9Y6F9 365 aa15.08■□□□□ 0
TPM1-228ENST00000560975 CXorf51AA0A1B0GTR3 108 aa15.07■□□□□ 0
TPM1-228ENST00000560975 PQLC2LA1A4F0 135 aa15.07■□□□□ 0
TPM1-228ENST00000560975 CBR1P16152 277 aa15.07■□□□□ 0
TPM1-228ENST00000560975 DLSTP36957 453 aa15.07■□□□□ 0
TPM1-228ENST00000560975 CCR2P41597 374 aa15.07■□□□□ 0
TPM1-228ENST00000560975 TEAD2Q15562 447 aa15.07■□□□□ 0
TPM1-228ENST00000560975 FNDC3BQ53EP0 1204 aaKnown RBP15.07■□□□□ 0
TPM1-228ENST00000560975 H3F3CQ6NXT2 135 aa15.07■□□□□ 0
TPM1-228ENST00000560975 SPAG16Q8N0X2 631 aa15.07■□□□□ 0
TPM1-228ENST00000560975 CRIPAKQ8N1N5 446 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms