RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 ITGADQ13349 1161 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 PMS2P3Q13401 168 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 TSC22D1Q15714 1073 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 CYP2R1Q6VVX0 501 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 LRRC17Q8N6Y2 441 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 ACOT11Q8WXI4 607 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 NRGNQ92686 78 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 DHRS1Q96LJ7 313 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 WFIKKN1Q96NZ8 548 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 THTPAQ9BU02 230 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 FNDC11Q9BVV2 318 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 ACTR6Q9GZN1 396 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 SLCO5A1Q9H2Y9 848 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 ANKRD19PQ9H560 264 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 SLC7A10Q9NS82 523 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 NDRG3Q9UGV2 375 aa13.67□□□□□ -0.22
RABGGTA-219ENST00000560871 ANKHD1Q8IWZ3 2542 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 A0A1W2PRQ8 180 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 GYG2O15488 501 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 LYZL6O75951 148 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 OR7A10O76100 309 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 DIRAS1O95057 198 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 ITGA5P08648 1049 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 MAGEA2P43356 314 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 CLDN17P56750 224 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 POU3F1Q03052 451 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 ZP4Q12836 540 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 DGCR6Q14129 220 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 ANKRD34AQ69YU3 496 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 PGM2L1Q6PCE3 622 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 SPNS3Q6ZMD2 512 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 PXKQ7Z7A4 578 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 CYP4Z1Q86W10 505 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 WDFY1Q8IWB7 410 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 UEVLDQ8IX04 471 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 STEAP2Q8NFT2 490 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 CCDC124Q96CT7 223 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 SGTBQ96EQ0 304 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 BTBD10Q9BSF8 475 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 MED18Q9BUE0 208 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 CLEC4MQ9H2X3 399 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 NMNAT1Q9HAN9 279 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 TAS2R5Q9NYW4 299 aa13.66□□□□□ -0.22
RABGGTA-219ENST00000560871 AKAP9Q99996 3911 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 HTR3EA5X5Y0 456 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 ACOT8O14734 319 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 SIAH2O43255 324 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 GOSR1O95249 250 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 FABP3P05413 133 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 H1F0P07305 194 aaKnown RBP13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 ADORA3P0DMS8 318 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 UMPSP11172 480 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 PPP3CBP16298 524 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 CRYGSP22914 178 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 PRKCDQ05655 676 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 FAPQ12884 760 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 FOXD4Q12950 439 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 NIPAL3Q6P499 406 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 SEZ6L2Q6UXD5 910 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 MBOAT2Q6ZWT7 520 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 LINGO2Q7L985 606 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 BHLHA15Q7RTS1 189 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 NANOGNBQ7Z5D8 188 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 DHFR2Q86XF0 187 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 CDC20BQ86Y33 519 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 NRMQ8IXM6 262 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 RNF113BQ8IZP6 322 aaKnown RBP13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 TMEM123Q8N131 208 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 UBE2J2Q8N2K1 259 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 ZNF433Q8N7K0 673 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 SLC7A13Q8TCU3 470 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 KISS1RQ969F8 398 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 S100PBPQ96BU1 408 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 ALKBH3Q96Q83 286 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 FUZQ9BT04 418 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 HDHD5Q9BXW7 423 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 LINC00470Q9BZP3 86 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 LIME1Q9H400 295 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 IL1RAPQ9NPH3 570 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 ASB6Q9NWX5 421 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 TAS2R16Q9NYV7 291 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 NOX1Q9Y5S8 564 aa13.65□□□□□ -0.22
RABGGTA-219ENST00000560871 DEFB108AA8MXU0 73 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 DNAJC8O75937 253 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 IFI30P13284 250 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 ITGA2P17301 1181 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 FUT1P19526 365 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 MAKP20794 623 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 IL32P24001 234 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 IST1P53990 364 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 RPS4XP62701 263 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 LGALS3BPQ08380 585 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 C1DQ13901 141 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 PIWIL3Q7Z3Z3 882 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 POMGNT2Q8NAT1 580 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 ANKK1Q8NFD2 765 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 NINJ1Q92982 152 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 BPIFA2Q96DR5 249 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 OR2M2Q96R28 347 aa13.64□□□□□ -0.23
RABGGTA-219ENST00000560871 PIP5K1AQ99755 562 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms