RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ADCK1Q86TW2 530 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 GPALPP1Q8IXQ4 340 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 ARIH2OSQ8N7S6 290 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 DEFB124Q8NES8 71 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 OR4K17Q8NGC6 315 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 ZNF417Q8TAU3 575 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 ZNF519Q8TB69 540 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 ZBTB8AQ96BR9 441 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 TRMT61AQ96FX7 289 aaKnown RBP11.64□□□□□ -0.55
SNX1-211ENST00000560829 ARL5BQ96KC2 179 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 ZNF587Q96SQ5 575 aaPredicted RBP11.64□□□□□ -0.55
SNX1-211ENST00000560829 ISG20L2Q9H9L3 353 aaKnown RBP11.64□□□□□ -0.55
SNX1-211ENST00000560829 FANCFQ9NPI8 374 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 SERINC1Q9NRX5 453 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 SSR3Q9UNL2 185 aa11.64□□□□□ -0.55
SNX1-211ENST00000560829 A0A1W2PQL4 384 aaPredicted RBP11.63□□□□□ -0.55
SNX1-211ENST00000560829 ZNF670-ZNF695F2Z2N8 137 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 STMND1H3BQB6 276 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 MASP2O00187 686 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 MT-ND5P03915 603 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 ENTPD1P49961 510 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 RPL27P61353 136 aaKnown RBP11.63□□□□□ -0.55
SNX1-211ENST00000560829 DCTN2Q13561 401 aaKnown RBP11.63□□□□□ -0.55
SNX1-211ENST00000560829 SLC22A10Q63ZE4 541 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 C3orf33Q6P1S2 294 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 RAB43Q86YS6 212 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 ADAMTS17Q8TE56 1095 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 TMEM41AQ96HV5 264 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 TBX5Q99593 518 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 COQ7Q99807 217 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 NXF2Q9GZY0 626 aaKnown RBP11.63□□□□□ -0.55
SNX1-211ENST00000560829 TXNIPQ9H3M7 391 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 SLC24A3Q9HC58 644 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 RPRD1BQ9NQG5 326 aaKnown RBP11.63□□□□□ -0.55
SNX1-211ENST00000560829 CFAP54Q96N23 3096 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 LOC101059948A0A1B0GTJ6 334 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 METTL15A6NJ78 407 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 LIPT2A6NK58 231 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.63□□□□□ -0.55
SNX1-211ENST00000560829 RNF13O43567 381 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 SNX4O95219 450 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 OR6A2O95222 327 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 RENP00797 406 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 FTH1P19P0C7X4 201 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 GAAP10253 952 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 IMPDH2P12268 514 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 CD53P19397 219 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 GALP22466 123 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 FGF9P31371 208 aaPredicted RBP11.63□□□□□ -0.55
SNX1-211ENST00000560829 NBL1P41271 181 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 ACKR1Q16570 336 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 KIF26BQ2KJY2 2108 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 ZNF829Q3KNS6 432 aaPredicted RBP11.63□□□□□ -0.55
SNX1-211ENST00000560829 ZNF468Q5VIY5 522 aaPredicted RBP11.63□□□□□ -0.55
SNX1-211ENST00000560829 JMJD6Q6NYC1 403 aaPredicted RBP11.63□□□□□ -0.55
SNX1-211ENST00000560829 H1FNTQ75WM6 255 aaPredicted RBP11.63□□□□□ -0.55
SNX1-211ENST00000560829 KLBQ86Z14 1044 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 SYS1Q8N2H4 156 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 ATP6V1C2Q8NEY4 427 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 OR51L1Q8NGJ5 315 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 OR2T4Q8NH00 348 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 SLC25A43Q8WUT9 341 aaPredicted RBP11.63□□□□□ -0.55
SNX1-211ENST00000560829 PSMF1Q92530 271 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 ALG12Q9BV10 488 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 MMP27Q9H306 513 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 PLGRKTQ9HBL7 147 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 EXOSC4Q9NPD3 245 aaKnown RBP11.63□□□□□ -0.55
SNX1-211ENST00000560829 TRIM36Q9NQ86 728 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 TXNL4BQ9NX01 149 aaKnown RBP11.63□□□□□ -0.55
SNX1-211ENST00000560829 ALKBH4Q9NXW9 302 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 ZMIZ1Q9ULJ6 1067 aa11.63□□□□□ -0.55
SNX1-211ENST00000560829 TRDV1A0A1B0GX56 115 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 SHISA8B8ZZ34 492 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 C11orf98E9PRG8 122 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 MS4A18H0YCH9 400 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 SLC30A4O14863 429 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 TRIM3O75382 744 aaPredicted RBP11.62□□□□□ -0.55
SNX1-211ENST00000560829 LIFP15018 202 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 IL11P20809 199 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 BMXP51813 675 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 TAS2R43P59537 309 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 RPS25P62851 125 aaKnown RBP11.62□□□□□ -0.55
SNX1-211ENST00000560829 HSF2Q03933 536 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 PUDPQ08623 228 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 SELENBP1Q13228 472 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 MS4A18Q3C1V0 323 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 ZNF404Q494X3 552 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 ACER2Q5QJU3 275 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 EEF1A1P5Q5VTE0 462 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 VASNQ6EMK4 673 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 EGFL6Q8IUX8 553 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 SLC35F2Q8IXU6 374 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 GTPBP8Q8N3Z3 284 aaPredicted RBP11.62□□□□□ -0.55
SNX1-211ENST00000560829 ADPRHL1Q8NDY3 354 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 OR6Q1Q8NGQ2 317 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 NXPE2Q96DL1 559 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 DNAJA3Q96EY1 480 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 CDADC1Q9BWV3 514 aa11.62□□□□□ -0.55
SNX1-211ENST00000560829 VSX1Q9NZR4 365 aaPredicted RBP11.62□□□□□ -0.55
SNX1-211ENST00000560829 B3GALT5Q9Y2C3 310 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms