RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 TRIM77I1YAP6 450 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 TNFSF11O14788 317 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 ADAMDEC1O15204 470 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 STX11O75558 287 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 LYZL6O75951 148 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 LY6HO94772 140 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 VENTXO95231 258 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 H6PDO95479 791 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 NTN1O95631 604 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 IL33O95760 270 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 HPRP00739 348 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 CST1P01037 141 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 OPN1LWP04000 364 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 AQP1P29972 269 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 RFX3P48380 749 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 HPCAP84074 193 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 DUSP7Q16829 419 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 MIDNQ504T8 468 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 PRR31Q5SQ13 230 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 DCST2Q5T1A1 773 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 ZNF544Q6NX49 715 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 FRRS1Q6ZNA5 592 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 ESPNLQ6ZVH7 1005 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 C16orf62Q7Z3J2 963 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 TSEN54Q7Z6J9 526 aaKnown RBP8.18□□□□□ -1.1
SMAD3-215ENST00000560424 VTCN1Q7Z7D3 282 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 AMIGO2Q86SJ2 522 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 EPHX4Q8IUS5 362 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 SLC44A2Q8IWA5 706 aaPredicted RBP8.18□□□□□ -1.1
SMAD3-215ENST00000560424 GPR32P1Q8NGA4 272 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 OR2V1Q8NHB1 315 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 DNAJC9Q8WXX5 260 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 SLC35B4Q969S0 331 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 DHRS1Q96LJ7 313 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 RDH12Q96NR8 316 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 SDF2Q99470 211 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 EPYCQ99645 322 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 PSD2Q9BQI7 771 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 TBL1XR1Q9BZK7 514 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 ANKRA2Q9H9E1 313 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 MYOZ1Q9NP98 299 aaPredicted RBP8.18□□□□□ -1.1
SMAD3-215ENST00000560424 EQTNQ9NQ60 294 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 TIGARQ9NQ88 270 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 USE1Q9NZ43 259 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 NDUFAF4Q9P032 175 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 MRTO4Q9UKD2 239 aaKnown RBP8.18□□□□□ -1.1
SMAD3-215ENST00000560424 OAZ3Q9UMX2 235 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 ABCG2Q9UNQ0 655 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 KCNE3Q9Y6H6 103 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 CADP27708 2225 aa8.18□□□□□ -1.1
SMAD3-215ENST00000560424 IGHV4-61A0A0C4DH41 118 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 LOC390937A0A1W2PQ73 354 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 B4DXG7 233 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 E7EQL1 145 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 TPST1O60507 370 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 KCNK2O95069 426 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 LGI1O95970 557 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 CT45A8P0DMV1 189 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 CT45A9P0DMV2 189 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 ZNF17P17021 662 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 ZNF23P17027 643 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 RHCEP18577 417 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 PTAFRP25105 342 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 GTF2A1P52655 376 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-215ENST00000560424 PSMD4P55036 377 aaKnown RBP8.17□□□□□ -1.1
SMAD3-215ENST00000560424 CARD18P57730 90 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 POU6F2P78424 691 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-215ENST00000560424 C17orf67Q0P5P2 114 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 ZNF155Q12901 538 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-215ENST00000560424 GRAMD1BQ3KR37 738 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 CYP27C1Q4G0S4 372 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 GPAT3Q53EU6 434 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 CT45A2Q5DJT8 189 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 RPS26P11Q5JNZ5 115 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-215ENST00000560424 TIMM23BQ5SRD1 257 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 RNF220Q5VTB9 566 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 LPCAT4Q643R3 524 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 OR2T5Q6IEZ7 315 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 TYW3Q6IPR3 259 aaKnown RBP8.17□□□□□ -1.1
SMAD3-215ENST00000560424 SHQ1Q6PI26 577 aaKnown RBP8.17□□□□□ -1.1
SMAD3-215ENST00000560424 IZUMO2Q6UXV1 221 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 ZBTB49Q6ZSB9 765 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 P2RY8Q86VZ1 359 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 ZDHHC13Q8IUH4 622 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 TUSC5Q8IXB3 177 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 PEX5LQ8IYB4 626 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 COX18Q8N8Q8 333 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 ICA1LQ8NDH6 482 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 OR2T29Q8NH02 315 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 OR5K1Q8NHB7 308 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 ABHD3Q8WU67 409 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 SLC9A6Q92581 669 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 OSTF1Q92882 214 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 CDS1Q92903 461 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 TPD52L3Q96J77 140 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 ZNF300Q96RE9 604 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-215ENST00000560424 RBM4Q9BWF3 364 aaKnown RBP8.17□□□□□ -1.1
SMAD3-215ENST00000560424 RSPO3Q9BXY4 272 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-215ENST00000560424 POLR2J2Q9GZM3 115 aaKnown RBP8.17□□□□□ -1.1
SMAD3-215ENST00000560424 GABARAPL1Q9H0R8 117 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms