RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ARHGAP11BQ3KRB8 267 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 SYT14P1Q58G82 188 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 TIMM23BQ5SRD1 257 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 PRAMEF8Q5VWM4 474 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 PRAMEF7Q5VXH5 474 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 ABLIM2Q6H8Q1 611 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 ALKBH2Q6NS38 261 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 TNFAIP8L2Q6P589 184 aaPredicted RBP12□□□□□ -0.49
SMAD3-214ENST00000560402 UGT2A3Q6UWM9 527 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 SEZ6L2Q6UXD5 910 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 P2RY8Q86VZ1 359 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 CARM1Q86X55 608 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 ZNF619Q8N2I2 560 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 ATP6V1C2Q8NEY4 427 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 LILRB1Q8NHL6 650 aaPredicted RBP12□□□□□ -0.49
SMAD3-214ENST00000560402 MIPOL1Q8TD10 442 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 SMAP2Q8WU79 429 aaPredicted RBP12□□□□□ -0.49
SMAD3-214ENST00000560402 TFAP2CQ92754 450 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 PROX1Q92786 737 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 MAL2Q969L2 176 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 MUCL1Q96DR8 90 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 ZHX1-C8orf76Q96EF9 292 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 MRPS26Q9BYN8 205 aaKnown RBP12□□□□□ -0.49
SMAD3-214ENST00000560402 GABARAPL1Q9H0R8 117 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 ACER3Q9NUN7 267 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 ING1Q9UK53 422 aaPredicted RBP12□□□□□ -0.49
SMAD3-214ENST00000560402 LIPT1Q9Y234 373 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 SLC35A3Q9Y2D2 325 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 MYRFQ9Y2G1 1151 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 SAMHD1Q9Y3Z3 626 aaKnown RBP12□□□□□ -0.49
SMAD3-214ENST00000560402 CADP27708 2225 aa12□□□□□ -0.49
SMAD3-214ENST00000560402 IGHV3-15A0A0B4J1V0 119 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 ZNF814B7Z6K7 855 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 hCG_2039718K7EN88 272 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 KIAA0513O60268 411 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 H6PDO95479 791 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 SEMG1P04279 462 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 IFNW1P05000 195 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 BCHEP06276 602 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 THBS1P07996 1170 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 SOD3P08294 240 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 MYF6P23409 242 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 FKBP2P26885 142 aaKnown RBP11.99□□□□□ -0.49
SMAD3-214ENST00000560402 DIO1P49895 249 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 RNF144AP50876 292 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-214ENST00000560402 GPR68Q15743 365 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 HEPHL1Q6MZM0 1159 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 TMPPEQ6ZT21 453 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 C16orf62Q7Z3J2 963 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 GALNT5Q7Z7M9 940 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 DTX2Q86UW9 622 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 FAM71CQ8NEG0 241 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 KBTBD8Q8NFY9 601 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 RADILQ96JH8 1075 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 EPYCQ99645 322 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 YTHDF1Q9BYJ9 559 aaKnown RBP11.99□□□□□ -0.49
SMAD3-214ENST00000560402 TRIM2Q9C040 744 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 FAM192AQ9GZU8 254 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 OR51I1Q9H343 314 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 SERHL2Q9H4I8 314 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 ZNF696Q9H7X3 374 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 NTN4Q9HB63 628 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 ENOPH1Q9UHY7 261 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 SLC13A4Q9UKG4 626 aa11.99□□□□□ -0.49
SMAD3-214ENST00000560402 MAGED1Q9Y5V3 778 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-214ENST00000560402 IGKV3D-15A0A087WSY6 115 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 M0QX08 132 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 CRLF1O75462 422 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 UGT2B17O75795 530 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 CYP7B1O75881 506 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 LYZL6O75951 148 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 ALPLP05186 524 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 IGFBP5P24593 272 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 APOBEC1P41238 236 aaKnown RBP11.98□□□□□ -0.49
SMAD3-214ENST00000560402 CDH11P55287 796 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 PCBP3P57721 371 aaKnown RBP11.98□□□□□ -0.49
SMAD3-214ENST00000560402 SMIM11AP58511 58 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 RPS26P62854 115 aaKnown RBP11.98□□□□□ -0.49
SMAD3-214ENST00000560402 KRTAP1-1Q07627 177 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 IL18R1Q13478 541 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 STK11Q15831 433 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 SLC36A3Q495N2 470 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 TTC33Q6PID6 262 aaPredicted RBP11.98□□□□□ -0.49
SMAD3-214ENST00000560402 VTCN1Q7Z7D3 282 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 ZNF100Q8IYN0 542 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 SETD9Q8NE22 299 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 PIGXQ8TBF5 258 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 TMEM19Q96HH6 336 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 ZNF300Q96RE9 604 aaPredicted RBP11.98□□□□□ -0.49
SMAD3-214ENST00000560402 TRAF4Q9BUZ4 470 aaPredicted RBP11.98□□□□□ -0.49
SMAD3-214ENST00000560402 QRSL1Q9H0R6 528 aaKnown RBP11.98□□□□□ -0.49
SMAD3-214ENST00000560402 SLCO5A1Q9H2Y9 848 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 EXOSC3Q9NQT5 275 aaKnown RBP11.98□□□□□ -0.49
SMAD3-214ENST00000560402 NDUFA13Q9P0J0 144 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 PRSS50Q9UI38 385 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 MGAT4BQ9UQ53 548 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 HDGFL3Q9Y3E1 203 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 WDR45Q9Y484 360 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 PLCE1Q9P212 2302 aa11.98□□□□□ -0.49
SMAD3-214ENST00000560402 A0A0G2JPF8 293 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms