RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 RTL8BQ17RB0 113 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 TUSC1Q2TAM9 212 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 OSGIN1Q9UJX0 560 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 STRAPQ9Y3F4 350 aaKnown RBP12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 HYAL4Q2M3T9 481 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 BCL7AQ4VC05 210 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 C9orf152Q5JTZ5 239 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 TSACCQ96A04 125 aaPredicted RBP12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 AQP7P3A6NL99 342 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 NCR1O76036 304 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 PDGFAP04085 211 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 WDR5P61964 334 aaKnown RBP12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 TMEM182Q6ZP80 229 aaPredicted RBP12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 INPP5KQ9BT40 448 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 PTPRMP28827 1452 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 PMS2P1A4D2B8 440 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 LALBAP00709 142 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 UBE3DQ7Z6J8 389 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 KIRREL1Q96J84 757 aa12.92□□□□□ -0.34
CSPG4P12-202ENST00000559989 TNS2Q63HR2 1409 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 DEPDC5O75140 1603 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 SUOXP51687 545 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 TEX261Q6UWH6 196 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 OR5K2Q8NHB8 316 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 APOBEC3GQ9HC16 384 aaKnown RBP12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 SALL4Q9UJQ4 1053 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 U3KQ87 197 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 M0R3H8 397 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 PRAMEF4O60810 478 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 SLC35E2BP0CK96 405 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 TNFSF8P32971 234 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 SLC16A14Q7RTX9 510 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 ULBP2Q9BZM5 246 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 WWTR1Q9GZV5 400 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 HTR2CP28335 458 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 CD99L2Q8TCZ2 262 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 BMPR1BO00238 502 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 MMP7P09237 267 aaPredicted RBP12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 BMPR1AP36894 532 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 WNT7BP56706 349 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 MENTQ9BUN1 341 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 IKZF5Q9H5V7 419 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 SLC2A9Q9NRM0 540 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 BLVRBP30043 206 aaPredicted RBP12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 KCNG3Q8TAE7 436 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 MOCOSQ96EN8 888 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 HRASLS5Q96KN8 279 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 KCNJ15Q99712 375 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 TACR1P25103 407 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 SPCS2Q15005 226 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 ALOXE3Q9BYJ1 711 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 AP5S1Q9NUS5 200 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 KCTD3Q9Y597 815 aa12.91□□□□□ -0.34
CSPG4P12-202ENST00000559989 LAMTOR5O43504 91 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 MRPL33O75394 65 aaKnown RBP12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 JTBO76095 146 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 GABRB3P28472 473 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 CLECL1Q8IZS7 167 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 UCN3Q969E3 161 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 C12orf57Q99622 126 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 A0A1W2PP55 124 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 A6NL46 340 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 ZNF487B1APH4 448 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 YKT6O15498 198 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 OR10A3P58181 314 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 NR0B2Q15466 257 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 CPEB3Q8NE35 698 aaKnown RBP12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 PKMYT1Q99640 499 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 RTP3Q9BQQ7 232 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 NTPCRQ9BSD7 190 aaKnown RBP12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 C11orf49Q9H6J7 331 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 BTNL2Q9UIR0 455 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 MRPS28Q9Y2Q9 187 aaKnown RBP12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 TIMM9Q9Y5J7 89 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 C5orf52A6NGY3 159 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 TMEM88BA6NKF7 163 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 ERHP84090 104 aaKnown RBP12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 FABP9Q0Z7S8 132 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 L3HYPDHQ96EM0 354 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 NRIP3Q9NQ35 241 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 ARHGAP23Q9P227 1491 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 RFPL4AA6NLU0 287 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 RFPL4AL1F8VTS6 287 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 SIX6O95475 246 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 WNT11O96014 354 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 F2P00734 622 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 CD46P15529 392 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 PSMB1P20618 241 aaKnown RBP12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 TMEM183BQ1AE95 376 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 THEM4Q5T1C6 240 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 CDC20BQ86Y33 519 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 MMP21Q8N119 569 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 KIAA1958Q8N8K9 716 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 SLAMF7Q9NQ25 335 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 KIAA1210Q9ULL0 1709 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 ABCD4O14678 606 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 GDPD3Q7L5L3 318 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 ASB11Q8WXH4 323 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 ZNF566Q969W8 418 aa12.9□□□□□ -0.34
CSPG4P12-202ENST00000559989 CAPNS2Q96L46 248 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms