RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 ZNF544Q6NX49 715 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 ZFP1Q6P2D0 407 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 TNFAIP8L2Q6P589 184 aaPredicted RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 PGM2L1Q6PCE3 622 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 SLC22A25Q6T423 547 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 CLEC2AQ6UVW9 174 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 LINGO2Q7L985 606 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 SSX8Q7RTT4 187 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 GRINAQ7Z429 371 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 UBE2J2Q8N2K1 259 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 ZNF781Q8N8C0 355 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 ANKFN1Q8N957 763 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 PIGXQ8TBF5 258 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 XAGE5Q8WWM1 108 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 DNAJC9Q8WXX5 260 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 TMEM234Q8WY98 164 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 TMEM158Q8WZ71 300 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 ROPN1LQ96C74 230 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 TUBGCP3Q96CW5 907 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 NEURL3Q96EH8 262 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 MAELQ96JY0 434 aaKnown RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 PPP1R36Q96LQ0 422 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 ADAD1Q96M93 576 aaKnown RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 ZNF385AQ96PM9 386 aaKnown RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 SORCS2Q96PQ0 1159 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 NR1H4Q96RI1 486 aaPredicted RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 THTPAQ9BU02 230 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 RSPO3Q9BXY4 272 aaPredicted RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 SLC38A1Q9H2H9 487 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 NELFAQ9H3P2 528 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 SEC61A2Q9H9S3 476 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 EFCAB1Q9HAE3 211 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 EXOSC3Q9NQT5 275 aaKnown RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 SLC17A5Q9NRA2 495 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 POLE3Q9NRF9 147 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 SERINC1Q9NRX5 453 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 SLC6A13Q9NSD5 602 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 FAIMQ9NVQ4 179 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 PNPOQ9NVS9 261 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 EMC3Q9P0I2 261 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 ARMCX1Q9P291 453 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 TMEM181Q9P2C4 612 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 MARCOQ9UEW3 520 aaPredicted RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 CDC42EP3Q9UKI2 254 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 MGAT4BQ9UQ53 548 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 TRAPPC4Q9Y296 219 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 SLC35A3Q9Y2D2 325 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 HDGFL3Q9Y3E1 203 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 WDR45Q9Y484 360 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 CHST2Q9Y4C5 530 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 TENM1Q9UKZ4 2725 aa5.05□□□□□ -1.6
USP3-215ENST00000559771 HEATR1Q9H583 2144 aaKnown RBP5.05□□□□□ -1.6
USP3-215ENST00000559771 TMED7-TICAM2A0A0A6YYA0 188 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 IGHV1-18A0A0C4DH31 117 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 IGHV4-61A0A0C4DH41 118 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 PRSS51A0A1B0GVH4 220 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 AGAP5A6NIR3 686 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 LIPT2A6NK58 231 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 FAAHO00519 579 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 GPR171O14626 319 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 ZNF208O43345 1280 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 MRPL33O75394 65 aaKnown RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 TFPIP10646 304 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 COX4I1P13073 169 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 SLC25A16P16260 332 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 NCF2P19878 526 aaPredicted RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 USF1P22415 310 aaPredicted RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 UQCRC2P22695 453 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 TACR3P29371 465 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 APOBEC3AP31941 199 aaPredicted RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 THBS2P35442 1172 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 ACAA2P42765 397 aaKnown RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 CDKN2CP42773 168 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 MAGEA8P43361 318 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 MRPL19P49406 292 aaKnown RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 CLK1P49759 484 aaKnown RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 CLNS1AP54105 237 aaKnown RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 OR2B6P58173 313 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 EPS8Q12929 822 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 KLF10Q13118 480 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 IKZF1Q13422 519 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 BLMHQ13867 455 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 CYLC2Q14093 348 aaPredicted RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 RCN1Q15293 331 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 PDCD2Q16342 344 aaPredicted RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 SMU1Q2TAY7 513 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 HIKESHIQ53FT3 197 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 CYB5R2Q6BCY4 276 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 OR7E24Q6IFN5 339 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 BHLHB9Q6PI77 547 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 KLHL17Q6TDP4 642 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 CASP12Q6UXS9 341 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 LRRC74BQ6ZQY2 392 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 IL17RELQ6ZVW7 336 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 C16orf62Q7Z3J2 963 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 MAVSQ7Z434 540 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 MYPOPQ86VE0 399 aaPredicted RBP5.04□□□□□ -1.6
USP3-215ENST00000559771 PGAM4Q8N0Y7 254 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 FBXL14Q8N1E6 418 aa5.04□□□□□ -1.6
USP3-215ENST00000559771 C17orf78Q8N4C9 275 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms